| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1146 |
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| Symbol | rpsJ |
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| ID | 8367568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1370819 |
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| End bp | 1371130 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644983572 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_003141260 |
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| Protein GI | 256819981 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00144145 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTAATC AACAAAAAAT AAGAATAAAG TTAAAATCTT ACGACCATAA CTTGGTAGAT
AAATCTGCTG AGAAAATCGT AAAAACAGTA AAAGCAACAG GTGCAGTAGT TACAGGTCCT
ATTCCATTAC CTATACACAA GAAAATCTTT ACTGTGTTGC GCTCACCTCA CGTAAATAAA
AAAGCACGTG AACAGTTCCA ATTGAGCTCT CATAAGCGTC TTTTAGATAT CTATAGCTCT
TCATCAAAAA CTATTGATGC TTTGATGAAA TTGGAATTGC CAAGTGGTGT AGAAGTAGAA
ATCAAAGTTT GA
|
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| Protein sequence | MGNQQKIRIK LKSYDHNLVD KSAEKIVKTV KATGAVVTGP IPLPIHKKIF TVLRSPHVNK
KAREQFQLSS HKRLLDIYSS SSKTIDALMK LELPSGVEVE IKV
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