Gene Coch_1100 details

Gene Information

• Locus tag: Coch_1100
• ID: 8367522
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 1300976
• End bp: 1301593
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 644983528
• Product: cytochrome c nitrate reductase, small subunit
• Protein accession: YP_003141216
• Protein GI: 256819937
• COG category: [C] Energy production and conversion
• COG ID: [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit
• TIGRFAM ID: [TIGR03153] cytochrome c nitrate reductase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGACAA CAGATAACAA CACCCCATCT ACTAAAAAAG GACGATGGTT TCGTTTCTTA 
ATTCCCTCGT TAGTAGGGAT ACTGATAGGG CTTTGCGGGT ATATTTTCTA TATATCCAAA 
GCATATACCT ATCTGTCTGA CGACCCCAAG GCGTGTGTGA ACTGCCATAT TATGGAGCCT 
GAGTACGCTA CGTGGATGCA CTCCTCTCAC GGCCGAAATA CCGTGTGTAA CGATTGCCAC 
GTGCCTCACG ACAACGTTTT TCGCAAATAT TATTTTAAAG CGAACGACGG TCTGCGTCAC 
GCCACGATGT TTACCTTCCG TATGGAACCA CAAGTGATTA AGATGCACTC TCCAGGGCAA 
AGAGTAGTAC AAGAAAATTG TATTCGTTGC CACAGCACCC TTGTAAGCGA AGTGCAAGCA 
GGCAAGGTAA CTGCTGAAAT GGCACACGCC GATAATGGCA AATTGTGCTG GGATTGCCAC 
CGCGAAGTAC CTCACAGCCG TGTGAGAGGG CTTAATGCTG CTCCTCATTC GCCTGTGCCT 
ATTGTGGACA ATATGCCGAG CAACACTCCC GATTGGCTTG ACAAAATGGT GAAAAACAGA 
GAAAAATCAA ATAATTAA 

 

Protein sequence

MATTDNNTPS TKKGRWFRFL IPSLVGILIG LCGYIFYISK AYTYLSDDPK ACVNCHIMEP 
EYATWMHSSH GRNTVCNDCH VPHDNVFRKY YFKANDGLRH ATMFTFRMEP QVIKMHSPGQ 
RVVQENCIRC HSTLVSEVQA GKVTAEMAHA DNGKLCWDCH REVPHSRVRG LNAAPHSPVP 
IVDNMPSNTP DWLDKMVKNR EKSNN