| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1085 |
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| Symbol | |
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| ID | 8367507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1285994 |
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| End bp | 1286671 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644983513 |
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| Product | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase |
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| Protein accession | YP_003141201 |
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| Protein GI | 256819922 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0313] Predicted methyltransferases |
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| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00458554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAC TCTATCTCAT TCCTACCCCC ATAGGCAATC TCGAAGATAT AACCTTGCGA
GCACTTCGTT TGCTCAAAGA GGTTGATATC ATCTTAGCCG AAGATACGCG CACCAGTAGT
AAGCTTCTCA AACACTACGA TATCCATACT CCTATGCAGA GTTACCACCT GTTCAACGAG
CACAAAGTGG TAGATGGTTG GGTACAGCGC ATCAAAGGGG GTACTACCGT AGCACTCATC
ACCGATGCAG GAACACCTGC CATTTCCGAT CCCGGCTTCT TGCTTACACG TGCTTGCCTT
ACTGAGGGAG TAGATGTAGA ATGCTTACCA GGAGCTACAG CCTTTGTGCC TGCCTTGGTA
AACAGTGGTT TGCCTAACGA CCGTTTTACC TTCGAAGGCT TCCTTCCCGA TAAAAAAGGA
CGACAAACAC GCCTCTCTCA ACTCACAACT GAAACCAAAA CGATGATTTT CTACATCTCC
CCGCATAAAT TGCTCAAAAC CCTCACTGAC TTTATCACCA CTTTCGGTAC CGACCGTCCT
GCGAGTCTCT CACGTGAGCT CACTAAACTA CACGAAGAGA CCCAACGTGG CACCCTCCAA
CAACTGTTTG ACCACTATAA AGACAAAAAT ATCAAAGGAG AAATAGTTCT TATTGTTTCT
GGGAAAAGTG AAAAATAA
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| Protein sequence | MSKLYLIPTP IGNLEDITLR ALRLLKEVDI ILAEDTRTSS KLLKHYDIHT PMQSYHLFNE
HKVVDGWVQR IKGGTTVALI TDAGTPAISD PGFLLTRACL TEGVDVECLP GATAFVPALV
NSGLPNDRFT FEGFLPDKKG RQTRLSQLTT ETKTMIFYIS PHKLLKTLTD FITTFGTDRP
ASLSRELTKL HEETQRGTLQ QLFDHYKDKN IKGEIVLIVS GKSEK
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