| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1079 |
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| Symbol | |
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| ID | 8367501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1281614 |
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| End bp | 1282369 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983507 |
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| Product | Patatin |
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| Protein accession | YP_003141195 |
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| Protein GI | 256819916 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0128373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTTAG GTTTAGTATT TTCAGGAGGC GGGGTGCGCG CTTTGGCACA CGCTGGATTG
TTAAAGGCTT TGGAAGAAAA AGGCTTGCAA CCCTCAATTA TTTCGGGTAC CAGTGGTGGA
GCACTCATTG GGGCACTCTA CGCTTGTGGG GTAAAGCCCG AGGATATGGT GCATTTTTTT
AAGGAAACAC CTGTGTTCAA ATGGTCGATG CTCACTTTTA AAAAAGTGGG ATTAGTAGAT
AGTGCTAAAT ATACCAAGTT CTTTAAAAAA CAATTCCAAT GTCCGACTTT TGAAGACTTG
CGATTGCCCT TAGTGGTAAC AGCTACCAAT CTGCTGAATG GTAAAGTACA GTATTTTAGC
AAAGGAGAGC TCATTCAGCC CCTCATTGCA TCGTCGGCAT TACCGCCTTA CTTCTCACCG
GTGAGAATAG GAGACAGTTT ATATTGCGAC GGGGGACTGC TGAACAACTT CCCCATAGAA
CCCCTCAAAG ACCGATGTGA TAGAATTATA GGGAGCTTTG TGAATCCGCT AGAAACGATT
ACCGAGAAGG AACTCAGCAA CTCGTTCCAG TTTATGCAAC GGATTTACAA CATCACTATG
GATGGCAATT ATAACCGCAA GTTCAAAAAA TGTGACCACT TGCTACTACA TAATCTCAGC
AATGTAGGCG TACTCGATAC TAAAATGCTC GATCACGCCT TCGAATATGG ATACGAACAA
ACAATTACCA AATTAGCTAA TTTGTCAGTT AGCTAA
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| Protein sequence | MKLGLVFSGG GVRALAHAGL LKALEEKGLQ PSIISGTSGG ALIGALYACG VKPEDMVHFF
KETPVFKWSM LTFKKVGLVD SAKYTKFFKK QFQCPTFEDL RLPLVVTATN LLNGKVQYFS
KGELIQPLIA SSALPPYFSP VRIGDSLYCD GGLLNNFPIE PLKDRCDRII GSFVNPLETI
TEKELSNSFQ FMQRIYNITM DGNYNRKFKK CDHLLLHNLS NVGVLDTKML DHAFEYGYEQ
TITKLANLSV S
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