Gene Coch_1076 details

Gene Information

• Locus tag: Coch_1076
• ID: 8367498
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 1277027
• End bp: 1278898
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 644983504
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_003141192
• Protein GI: 256819913
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACAA CTGAATACGA TGTGATAGTA GTGGGCGGAG GACACGCAGG TGCTGAAGCT 
GCCGCTGCAG CTGCCAATAT GGGAGCCAGC ACACTACTGA TTACTATGAA CTTACAACAT 
ATCGCCCAAA TGAGCTGTAA CCCTGCTGTG GGAGGTATTG CCAAAGGGCA GATAGTGCGC 
GAAATAGACG CCTTGGGGGG CTATATGGGG ATTATCACTG ATAAAACCGC CATTCAATTT 
AAGATGCTCA ACCAATCGAA GGGTCCTGCT ATGTGGAGTC CGCGTGCACA ATCTGACCGT 
ATGCGTTTTT CGGAAGCGTG GCGATTACAG TTGGAAAGTC TGCCTACACT TGATTTCTTT 
CAAGGAATGG TAAACGACCT TCTGATTGAG AAAGACAAGG TAGTAGGAGT ACGCACTTCG 
TTGGGGATTA CTATCAAAGC GAAGAGTGTA GTGCTTACCA ATGGTACTTT CTTGAACGGA 
GTGATGCACA TAGGAATGAA ACAGTTTGGC GGAGGGCGTG CAGGTGAACC CGCAGCATAC 
GGCATCACCG AATGCCTTGT ACAACACGGT TTTGAGGCGG GACGTATGAA AACAGGAACG 
CCTCCACGCG TAGATGCGCG TTCGCTTGAT TTCAGTAAGA TGATTCCTCA ACCGGGCGAT 
GAGCATCCGC AAAAGTTTTC TTTCTCTGCT GAAACACAGC CGCTCGCAGT GCAAAAAGAC 
TGCTATATGA CATACACCAG CGAGCGCGTA CATAATATAT TGCGCACGGG CTTCGACCGT 
TCGCCTATGT TTCAGGGCAT TATCCACGGT GTGGGTCCGC GCTATTGCCC TTCGATAGAA 
GATAAAATTA ATCGTTTTGC GGACAAAGAC CATCATCAGC TGTTTGTAGA GCCCGAAGGC 
TGGCATACCG TAGAGATGTA CGTGAATGGC TTTTCGACTT CTTTGCCCGA AGAAGTGCAA 
TATGCTGCCC TGAGTCAGGT AGCAGGTTTT GAGAAGGTGA AGTTTTTCCG TCCAGGGTAT 
GCGATAGAGT ACGACTATTT TCCGCCTACC CAGCTGAAAC ATACGCTTGA AACGAAACTT 
ATAGAAAACT TATACTTCGC GGGGCAAATC AACGGAACTA CGGGCTATGA AGAAGCCGCT 
GCACAAGGAC TAATGGCAGG CGTGAATGCG GTGCTGAAAA TACGCGAGCG AGCTCCTTTT 
GTACTGAAAC GCGACGAGGC TTATATAGGA GTTTTGATTG ATGACCTCAT TACCAAAGGC 
ACCGAAGAGC CTTATCGTAT GTTTACCTCA CGTGCTGAAT ACCGCACCCT CTTGCGACAG 
GATAATGCTG ATAGGCGATT GACTCCGCTA GGGTATGAAA TAGGTACTGT AAGTGAAGCG 
CGCTATCGTG CGTGGGAAGC CAAAGAACGC AAGGTGAGTG CATTTATCAC TTATATAAAG 
GAATTGAGTG TTACCCCCGA AGAGGTAAAC CCTATACTCG AAAAATACGA GTCATCACCA 
ATGAAACAAG GCGACAAGTT CCAAAAGGTA CTTTCTCGCC CCGATGTAAC TCTTGCTGAC 
TTTGAGGCTA TAGACCGTAT TGCCGAATAT ATAAAGAATA ACGAACTTAC CGAAGAAGAA 
AAAACCTGCG CAGAAGTGGA GGTGAAATAC GCCGGCTATA TAGAAAAAGA GCGCAATAAT 
GCTGATAAAC TCAACCGCTT GGAGAGTGTG CGCATTCCCG ACAACTTTGA TTACGACAAA 
ATAGTATCGC TCTCGTTTGA AGGGCGCGAA AAGCTGAAAA AGATACGCCC TGTTACCCTT 
TCGCAAGCCT CACGCATCAG TGGGGTATCG CCAGCGGATA TCAGTATATT GCTGATATAT 
ATGGGAAGAT AA 

 

Protein sequence

MFTTEYDVIV VGGGHAGAEA AAAAANMGAS TLLITMNLQH IAQMSCNPAV GGIAKGQIVR 
EIDALGGYMG IITDKTAIQF KMLNQSKGPA MWSPRAQSDR MRFSEAWRLQ LESLPTLDFF 
QGMVNDLLIE KDKVVGVRTS LGITIKAKSV VLTNGTFLNG VMHIGMKQFG GGRAGEPAAY 
GITECLVQHG FEAGRMKTGT PPRVDARSLD FSKMIPQPGD EHPQKFSFSA ETQPLAVQKD 
CYMTYTSERV HNILRTGFDR SPMFQGIIHG VGPRYCPSIE DKINRFADKD HHQLFVEPEG 
WHTVEMYVNG FSTSLPEEVQ YAALSQVAGF EKVKFFRPGY AIEYDYFPPT QLKHTLETKL 
IENLYFAGQI NGTTGYEEAA AQGLMAGVNA VLKIRERAPF VLKRDEAYIG VLIDDLITKG 
TEEPYRMFTS RAEYRTLLRQ DNADRRLTPL GYEIGTVSEA RYRAWEAKER KVSAFITYIK 
ELSVTPEEVN PILEKYESSP MKQGDKFQKV LSRPDVTLAD FEAIDRIAEY IKNNELTEEE 
KTCAEVEVKY AGYIEKERNN ADKLNRLESV RIPDNFDYDK IVSLSFEGRE KLKKIRPVTL 
SQASRISGVS PADISILLIY MGR