Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1059 |
Symbol | |
ID | 8367481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1257529 |
End bp | 1259076 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644983487 |
Product | hypothetical protein |
Protein accession | YP_003141175 |
Protein GI | 256819896 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00189201 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGAA TTTTTTTAAG TACAATTTTG CTGTCATTTA TCATTACTGG CTGTAAGAAA GATAATGACA CATTTGTAGA AGACCAAAAA AACGAAGAGC CACAACAAAC TCTTGTAACC GATGGGGTAG TTGGAGGACG TTACCAGTTT TCTTCTTCTG AGAGTTTATC TAAAATGATG GGAGAATTGA GAAATGATGA AGAGCTTTTA GAAAAAAAGA TGAAAGAACT TTATTTAAAA GGGTTTCGTC CTAAATATCC TATAGGGGAT ATAGAAAATG ACCCTGAACT CATAAAACTT TATGAAGGAA GACCAGATAC GGTTGATGAT GAAACAGAAG AGGAGAAAGA GGAAGAAAAT ATGATTTCTG ACCCTCTTTT AGCTTCTTTT ATTGATGAAA ATAATGAAAT AGTTGTAAAA GACACTTTAT ACAAGTTTAC TACAAGAGGA GTTTTTTCTT CTCATCTAAA GGATTCTCTT AAACTTAAAA ACTATCTAAA AGATCGTCAA CCTCAACTTT CAGCTGAGGA ATTATTAAAA CTTCGGGAGA CTGCTTCTGG AAAACAGCAA GTAGCAGACG GGGTATACAG ATTTATAGCT CCTATCTCTG AATTAGAGAG AAACAATATT AAAGAAGAGC AAAAAAGAAT AGCAAACTTA ACGCCAGCTA ATGAATTACA ACCTATTATT GATGGATTGC CTATAACAAG AGGAGATAGA AATTGGTTTC TTCATAGAAT ATTTGGAGAA AGTAGAGTCG CAACAGAGCA TTTTGACAGA AGACATCGTG TGAAAATAGA ATTTTTTAAT CAAAACTACG GATTTTATAA GTCAGTAGGT ATTTCAGTAA GAAATCAAAC ACGTCGCTTT AGGATATGGT GGGCATCAAA GGCTAATGAA GTAGTTTTAG GAATTAATTA TATTTATATG ACATACAAAA TGCCTACAGC CCCTCTTAAA GAGTTACAAG CGGCTAAGGA TGAAAATGAG TTTATTATAC TTGCTTACAA AGGAGATTTT TACTTTCACG CACAAAATAA TTATTTAAAA TCAACTTTTA AAGTAGAGGA AGCAAAACTT CCTTTTATAA AATATAATAA TGAAAAATTA CTTACAATTT ATATTCCAAG TGTCGCTGGG TATAAAATAG ACTATGAAAA AGAGCTTTTT GTATCAGATT TATTGTCACA AAAAAATATT GCAACACTCT ATAAAATGGG TTTTGATTTT CTGAGAAATA TAGGTTCAAA AGATAAAGAG TTTGCTGTGG TTAGAACCCC TCAGTTTGAA GATGAAATAG AAGCAATGTA TTTTGCAGAA CGTTACCAAG GTGAGAATAC AAATAAGAAA AAAATACATC TAAGCACTGA CTATGGATTT CTTCTTACCT TTACAAGTTC TGTTGACAAG AAGGGAGGTA AATGGTATAA CAATTTTGGA GTAAAACCTC CCGAATTAAG AGAATATAAG ACTGTAAAAT ATGATTTTTA CGGTATGGCA AGAGTAGGAG GTACTTGGAG AGGTGTGAGA ATGGTTTATG AAAAATAA
|
Protein sequence | MKRIFLSTIL LSFIITGCKK DNDTFVEDQK NEEPQQTLVT DGVVGGRYQF SSSESLSKMM GELRNDEELL EKKMKELYLK GFRPKYPIGD IENDPELIKL YEGRPDTVDD ETEEEKEEEN MISDPLLASF IDENNEIVVK DTLYKFTTRG VFSSHLKDSL KLKNYLKDRQ PQLSAEELLK LRETASGKQQ VADGVYRFIA PISELERNNI KEEQKRIANL TPANELQPII DGLPITRGDR NWFLHRIFGE SRVATEHFDR RHRVKIEFFN QNYGFYKSVG ISVRNQTRRF RIWWASKANE VVLGINYIYM TYKMPTAPLK ELQAAKDENE FIILAYKGDF YFHAQNNYLK STFKVEEAKL PFIKYNNEKL LTIYIPSVAG YKIDYEKELF VSDLLSQKNI ATLYKMGFDF LRNIGSKDKE FAVVRTPQFE DEIEAMYFAE RYQGENTNKK KIHLSTDYGF LLTFTSSVDK KGGKWYNNFG VKPPELREYK TVKYDFYGMA RVGGTWRGVR MVYEK
|
| |