| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1025 |
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| Symbol | |
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| ID | 8367445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1211245 |
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| End bp | 1212546 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983451 |
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| Product | MiaB-like tRNA modifying enzyme YliG |
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| Protein accession | YP_003141141 |
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| Protein GI | 256819862 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.813856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAACAA GAAGTATAAA GAAAAACACT ATAAACGTCG TAACCCTTGG GTGTTCTAAA
AACGTGTATG ACAGCGAAGT ACTGATGGGG CAACTTAAAG CGGGTGGCAA AGAGGTGGTG
CACGAGCAAA AGGGCAATAT TGTGGTGATT AACACTTGTG GGTTTATCAA CAATGCCAAA
GAGGAGAGTA TCAACACTAT TTTGGACTAT GTGCAACAGA AAGAAGCTGG ATTGGTAGAT
AAGGTGTTTG TGATGGGGTG TCTCTCTGAA CGCTATAAGC CCGATTTGGA GAAAGAAATC
CCTGATGTAG ACCAATACTT CGGTACTAGC GAACTGCCTG CCCTTTTGAA AGTACTCGGC
GCCGACTATA AACACGAGCT CATAGGAGAG CGCCTCACTA CTACCCCTAA GAACTACGCT
TATCTGAAAA TATCGGAAGG TTGCGATCGC CCTTGTAGCT TTTGTGCAAT TCCACTAATG
CGCGGGGCGC ACCTATCGAC CCCTATTGAA GCTCTTGTAA CCGAAGCGGA GAAGTTGGCT
GCCAAAGGGG TGAAAGAACT TATACTCATC GCCCAAGATA TTACCTACTA CGGTCTTGAC
CTCTACAAAA AGCGTGCTTT GGCTGACCTA TTGCGTGCTC TTGTGAAAGT AGAAGGCATC
GAGTGGATAC GCATACACTA TGCATTCCCT ACCGGCTTCC CGATGGACGT ATTGGAAGTG
ATGAAGACTG AACCTAAAAT CTGCAACTAT TTAGACATTC CGCTTCAACA TATTTCTGAC
TCTATCCTCG CAAGTATGAA GCGCGGTACT ACCCAAGCGA AGACTACTAA ACTGCTGAAA
AAGTTCCGCG AAGCAATACC CGAAATGGCT ATACGCACTA CCCTTATTGT GGGGTACCCA
GGAGAAACGG AAGAAGACTT CCAGAAGCTG AAAGACTTTG TAAAAGAAAT GCGCTTCGAC
CGTTTGGGTT GTTTTACTTA CAGTCACGAG GAAAACACTA CCGCCTATGC GCTCGAAGAC
GATGTGCCGG AAGAAGTAAA ACTTGCACGT GCTAACGAGA TTATGGAGAT ACAATCGCAA
ATATCGTGGG AGCTTAACCA AGAGAAAGTA GGAAAGACTT TCCGTTGTCT CATCGACCGC
AAAGAGGGCA ATTACTTTGT AGGTCGCACC GAATACGACT CGCCCGATGT AGACAACGAG
GTGCTTATCG ATGCTAAAAA ACACTATGTA AAGATAGGTG ATTTTACAGA TATAAAGATT
ATCGAGGCTA CCGATTACGA TTTGTATGGA GAGCCGTGCT AA
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| Protein sequence | MRTRSIKKNT INVVTLGCSK NVYDSEVLMG QLKAGGKEVV HEQKGNIVVI NTCGFINNAK
EESINTILDY VQQKEAGLVD KVFVMGCLSE RYKPDLEKEI PDVDQYFGTS ELPALLKVLG
ADYKHELIGE RLTTTPKNYA YLKISEGCDR PCSFCAIPLM RGAHLSTPIE ALVTEAEKLA
AKGVKELILI AQDITYYGLD LYKKRALADL LRALVKVEGI EWIRIHYAFP TGFPMDVLEV
MKTEPKICNY LDIPLQHISD SILASMKRGT TQAKTTKLLK KFREAIPEMA IRTTLIVGYP
GETEEDFQKL KDFVKEMRFD RLGCFTYSHE ENTTAYALED DVPEEVKLAR ANEIMEIQSQ
ISWELNQEKV GKTFRCLIDR KEGNYFVGRT EYDSPDVDNE VLIDAKKHYV KIGDFTDIKI
IEATDYDLYG EPC
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