| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1021 |
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| Symbol | |
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| ID | 8367441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1204007 |
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| End bp | 1205755 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983447 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003141137 |
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| Protein GI | 256819858 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00103937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TCATTTATAC CACCTTAATT CTCGTCTTTT TCTCACAAGT ATTTTCTTGT
AAGTTAGAAG ACCACTTCCT CGAAAAGAGT TTAGGAAGCG ATGTGAATGT CGATTCTATC
TTTTCGAGCA AACAGAAATC TCTCTCGGCT ATTGCCCAAG CCTACGCGAT GAGCCTGCAA
TCGGGTATTA CTTTGCGTTA CGACAATGGG CGCATTAGCG GACTGAAAGC GGGAACGCTC
TCTCACCTAT CGGGAGAGGT GAACGATGTG AAATTCAGTT GGGAAGACAC CTATAAAATT
CAACGTTCTG GAATGGTAGC CAGCGACTCC GATGGCAAAG CATTGAGTTC CGATGGTTTC
GTGTTCAACT ACCAATCTAT CCGTCAGTGC TATTTGGTGA TTGAGAATAT CGATAAAGTC
CCCGATCTTA CTGAGGTACA AAAGAAAAGT ATCAAAGCCG AAATGTATAC CCTCATCGCC
TACCGATATG AGGAGATGTT CAAACGTTAC GGCGGGGTGC CTATTATAGA AGGTACACTT
TCAGTAGATT CCGACCTGAA TATTCCTCGC GCTACTTTGC GCGCTACCTT AAACCATATT
ATTGCCCTTT GCAACAAAGC TATTAGCGAC CTGCCCGATA GCTACAATGC TTCGGAAAAA
GGACGTGTAA CCAAAGGTAT CCCAATGTGT ATCAAAGCCG AAGCATTGAT GTACGCCGCG
CGTCCGCTGT TCAATAGCAA TATGCCTTAT ATGAGTTTGG GCGGCAATAA CAACCTGATT
TGTTTTGGTA CACAAGACGC TTCGTTGTGG CAACAAGCCA TAGAGGCTAA TGAGCAAGTG
ATACGTTGGG CAACTGCCAA TGGTTATCAA ATCATCAATA CGGGCAACCC TTTAGCCGAT
TACGGTACAG CAGTAGCAAC CCCTAACAAC CGAGAAGTAC TCCTCGCCTT TAAATCACAA
AGTTTTATAG AGGCTTATAA CCCTCACAGC CAACCAGGAG GGGCAAATTC TATGAGTTAC
TTGCAACTTA CCCAATACTA CAAAACTGAT GGTACCAACC AAACGTGGAC GGGTGAAAAC
TGGGAAAGCT ACGCAACTTA TGTGAACAAG TGCAATGAGT TAGAAGCCCG TTTTAAAGCC
TCAGCAGCGA TTGCAGGGCA ACAAGCGTGG AACAACCCTA GTTCGCATTA CTGGTCGAGT
GAGACTTTGG CAAATGCCTC TACTTGGGAA AAGAGAGCAG GCAGTGAAGG CGCAGGACGC
CGTGTGAAAT TCTTCTATAT GGCTGATACC CGCGATTGGT TTGAATTCCC TTTGTACCGT
TTGGCTGAGT TCTATTTGAA TCTCGCCGAA GCCTATAACG AAGCAGGTAA TCCTGCTCAG
GCTTTGCAAA ACCTAAATGT TATCCGCTCG CGTGCAGGGC TACCCAATGT TACTGAAACA
GGACAAGACG TTTTGCGCAA ACTCGTGCAA AGAGAGTGGG CGGTAGAGTT CTATGAAGAA
AATCACCGTT ATTTCGATGT AAAACACTGG AAACTCACCG ATATTGCCAA TGGTATCATT
GGAGGGGAAA AGAAAGGAGT AGTTTTTGAG TACGCCCCAG GAAAATCGGA AGGGTGGAAT
GCGTGGGATT ACGCTTCTTA TGCTGTGAAA CCTGTCTATA CAGGGTATTG GGACAACAGT
CAGTACTTAG AGCCTTTCCC TCAATCGGAA GTGAACAAAG GCTACTTGAT ACAAAACCCT
GGGTACTAA
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| Protein sequence | MKKLIYTTLI LVFFSQVFSC KLEDHFLEKS LGSDVNVDSI FSSKQKSLSA IAQAYAMSLQ
SGITLRYDNG RISGLKAGTL SHLSGEVNDV KFSWEDTYKI QRSGMVASDS DGKALSSDGF
VFNYQSIRQC YLVIENIDKV PDLTEVQKKS IKAEMYTLIA YRYEEMFKRY GGVPIIEGTL
SVDSDLNIPR ATLRATLNHI IALCNKAISD LPDSYNASEK GRVTKGIPMC IKAEALMYAA
RPLFNSNMPY MSLGGNNNLI CFGTQDASLW QQAIEANEQV IRWATANGYQ IINTGNPLAD
YGTAVATPNN REVLLAFKSQ SFIEAYNPHS QPGGANSMSY LQLTQYYKTD GTNQTWTGEN
WESYATYVNK CNELEARFKA SAAIAGQQAW NNPSSHYWSS ETLANASTWE KRAGSEGAGR
RVKFFYMADT RDWFEFPLYR LAEFYLNLAE AYNEAGNPAQ ALQNLNVIRS RAGLPNVTET
GQDVLRKLVQ REWAVEFYEE NHRYFDVKHW KLTDIANGII GGEKKGVVFE YAPGKSEGWN
AWDYASYAVK PVYTGYWDNS QYLEPFPQSE VNKGYLIQNP GY
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