| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1012 |
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| Symbol | |
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| ID | 8367432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1188786 |
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| End bp | 1191200 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983438 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003141128 |
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| Protein GI | 256819849 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.722043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG GGCAAAATTA TAAAAACAAA GCAATATGTA ATTCTCATTT TAAGGGAAGG
TACAGGCAGG AAGGTGTTTT TTATAAAAAC GTTAATGTAT CTATGAGATA TAGCAAACAC
ATTTTTAAAA CGCTTATTTC GTTACTTATG ATAGGTTGCG CAACACCCGC TATCCTAAAA
TCGGATAATG AAAAACTCAC CCAAAAGAGT TTCAGTGGTG ATAAACATAT AGAACAGCGC
GTAGATTCGG TACTGCGTTT GATGACTCTT GAAGAAAAAA TCGGACAAAT GACGCAATTC
TCAGCCGATT GGTCGGTTAC AGGACCTGTA ATGGCTGATA AGTACCAACC TTACCTCGAA
AAAGGCTTGG TAGGAAGTAT TTTTAACGCT ACTTCGGTTG CAGGTATACG AAAATTGCAA
AAAATAGCGG TAGAACAAAC GCGTTTAGGT ATTCCTATCC TCTTTGGTCA AGATGTGATA
CACGGCTATA AAACTATCTT TCCCATTCCG TTAGCTGAGT CTTGCTCGTG GGATTTGGCA
TTGATGCGCA AAACAGCTGA ACTCGCTGCC CGTGAAGCTA GTGCCGATGG TATTAACTGG
ACGTTTGCTC CTATGGTAGA TATCACCCGC GATGCTCGTT GGGGACGCGC AATGGAAGGC
GCAGGCGAAG ACCCTTATTT AGGAAGCCTT ATTGCCGAAG CGCGGGTAAA AGGATTTCAA
GGGGGAGACA ATTGGCAAAC GTTGAGTAGC CCTCACACAC TTTTAGCTTG TGGTAAACAC
TTTGCCGGCT ATGGAGCTGC CGAATCAGGC AAGGACTATA ATACAGCTGA ACTCTCTATG
CACACCTTGC GCAATGTATA TTTACCTCCT TATGAGGCGA CCCTAAAAGC AGGAGTGGGC
AGTATAATGG CTTCTTTGAA CGAGATAAAC GGAGTGCCTG CCACCGCCGA CAAGTGGTTG
CTTACTGAGG TGCTTCGCAA AGAATGGGGC TTTAACGGCT TGTTAGTGAG TGATTACACA
GGCATTAACG AGTTGGTGCG ACACGGGGTA GCCAAAGATG ATAAACAAGT GGCAAACCTC
TCAGCCAATG CAGGAATAGA AATGGATATG AACGGGGCAA CCTTTATTAA ATACCTTAGT
GCCTTAGTGA AAGAAGGCAA AGTAACCGAA AATCAAATTG ATAAAGCAGT AAGGCATATA
TTGGAAATGA AGTTTCTTTT AGGTCTTTTT GATGACCCCT ACCGATACTT AGATGAAACT
CGTGCCAAAG AAAATACTTT TACTGAGGAA TATCTGAAAG TAGCGCGACA AGCTGTTGCT
TCCTCAGTAG TACTCTTGAA AAATGAAGCT GAAGCGTTAC CCATCAAAAA GAATAGCGAT
AAAACTATTG CTGTAATAGG ACCTATGATG AACAACACAA GTGATATAAA CGGCAGTTGG
ACGTGCTTAG GTGACGGCAA ACAAAGCGTG AGTTTACTCA CAGGGCTTAC TGAGAAATAC
AAGGGTACAA ATGTAAAACT CCTCTATGCC GAAGGCTGTG GTTTTACAAC TATTTCAACA
GAACAACTCA AAGAAGCGGT TGCTATAGCT CGCAAAGCTG ATAGGGTATT AGTAGCTGTA
GGTGAACAGA GTAGCTGGGC AGGAGAATCG GCGGTGCGCA CCGACATTCG TTTGCCTCAA
GCACAACGCC AATTGCTCGA AGCACTAAAA GCCATAAACA AGCCCATAGC TATTATTACT
TTTAGCGGAC GACCGCTCGA CCTTTCTTGG GAAAACGAGA ATGTACAAGC TATTTTGCAA
GCGTGGTTTC CTGGTACGCA AGGGGGCAAT GGCATTGCCG ATGTGATAGC AGGCGATGTA
AATCCTTCGG GACACTTAAC GATGTCTTTC CCTCGCAGTG TAGGGCAAAT TCCTATTTAT
TACAACTACA AAAGCACAGG GCGACCTGTA CATACAAATA ATGAAGAAGT AGACCACCGC
CCTCATTATA ATGCAGGATA TTTGGATAGT TCTATTACGC CTCTTTATCC TTTTGGGTAT
GGACTCAGCT ATACTACCTT TGCTATTAGT AATGTGCATC TGAATAAAAA AAGTATAAAA
CGCTATAACG ATAGCATTAT AGTAAATGCC TCTGTGCAGA ATACAGGAAG AACCGAGGGC
GAAATAGTGG TACAACTCTA TACCCGACAG TTAGTAGCAA GTGTTAGCCG CCCCGTAAAG
GAATTAAAAG GGTTTCAGAA AATCCCTCTC AAAGCAGGTG AAAGCAAACA AGTCCGTTTT
GAACTGCCTT CCGAAGCTCT TGCCTTTTAC GGTATCAATG GAAAAAAGGA CACTGAGCCC
AGCGAGTGCC TGCTGTGGGT GGGCTTACAT TCTGCCGATA ATAGTAACGA ACAACATTTT
ACAATAGAAG AATAA
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| Protein sequence | MSKGQNYKNK AICNSHFKGR YRQEGVFYKN VNVSMRYSKH IFKTLISLLM IGCATPAILK
SDNEKLTQKS FSGDKHIEQR VDSVLRLMTL EEKIGQMTQF SADWSVTGPV MADKYQPYLE
KGLVGSIFNA TSVAGIRKLQ KIAVEQTRLG IPILFGQDVI HGYKTIFPIP LAESCSWDLA
LMRKTAELAA REASADGINW TFAPMVDITR DARWGRAMEG AGEDPYLGSL IAEARVKGFQ
GGDNWQTLSS PHTLLACGKH FAGYGAAESG KDYNTAELSM HTLRNVYLPP YEATLKAGVG
SIMASLNEIN GVPATADKWL LTEVLRKEWG FNGLLVSDYT GINELVRHGV AKDDKQVANL
SANAGIEMDM NGATFIKYLS ALVKEGKVTE NQIDKAVRHI LEMKFLLGLF DDPYRYLDET
RAKENTFTEE YLKVARQAVA SSVVLLKNEA EALPIKKNSD KTIAVIGPMM NNTSDINGSW
TCLGDGKQSV SLLTGLTEKY KGTNVKLLYA EGCGFTTIST EQLKEAVAIA RKADRVLVAV
GEQSSWAGES AVRTDIRLPQ AQRQLLEALK AINKPIAIIT FSGRPLDLSW ENENVQAILQ
AWFPGTQGGN GIADVIAGDV NPSGHLTMSF PRSVGQIPIY YNYKSTGRPV HTNNEEVDHR
PHYNAGYLDS SITPLYPFGY GLSYTTFAIS NVHLNKKSIK RYNDSIIVNA SVQNTGRTEG
EIVVQLYTRQ LVASVSRPVK ELKGFQKIPL KAGESKQVRF ELPSEALAFY GINGKKDTEP
SECLLWVGLH SADNSNEQHF TIEE
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