| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0944 |
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| Symbol | |
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| ID | 8367363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1100565 |
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| End bp | 1101752 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644983369 |
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| Product | threonine dehydratase |
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| Protein accession | YP_003141060 |
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| Protein GI | 256819781 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.463198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTTTA CCACAGCACG TGAGCACCTC AAGAGTGTGC TCCTCCCTAC ACACCTTATT
TATAGTCCGC TCTTCTCAGA AGAATCTGAC AACAAAATCT ACATCAAGCC TGAAAACCTT
CAAAAGACAG GAGCTTTTAA GATTCGTGGC GCTTATAACA AAATCCTTAA ACTCACCGAG
GAAGAGAAAA AAAAAGGAGT TATTGCTTCT TCAGCAGGAA ACCACGCACA AGGCGTTGCC
TACGCAGCAC GTGAATTGGG TATCAAAGCC GTGATTGTAA TGCCTAAAAC TACACCTCTT
ATCAAAGTGC AATCTACTAA AAAGTACGGT GCAGAAGTAG TGCTCTACGG CGATGTATAC
GACGATGCTT ACCAAAAAGC GAAAGAGCTG GAAGAGAAAG AAGGCTACGT GTTTGTACAC
CCTTTCAACG ACCCTGATGT GTTGGAAGGA CAAGGTACTA TCGCCTTAGA GATATTGGAA
GAACTGCCTA ACACCGATGT GATAGTTGTA CCTATAGGCG GTGGTGGACT TATCTCGGGG
ATTGCTTGCG CTGCTAAACA GCTCAAACCC GATATTAAGA TTGTAGGTGT AGAACCCTCA
GGAGCTGCTT CGGCAACCGA AGCGCTCAAG AAAAATAAGC TTGTTAGCCT ACCTGAAGCC
AATACCATTG CTGATGGAAC AGCTGTAAAA CGGATAGGAG AGCTAAATTT TGAGTATATC
AAGAAGTATG TAGACGAGGT GGTAACCGTA GATGACTATG AACTTACGGA AGTTTTCTTG
CTATTGGCAG AAAAGCACAA GCTTATCGCT GAGAACTCAG GCGTATTACC TTTGGCAGCA
CTCAAAAAAC TCACCGACCG CGGTAAGAAC GTTGTGCCTG TAGTAAGTGG GGGCAATATA
GATGTGCTAA TGATATCTTC GATGATAGGC AAGGGATTGG TGAGCAGAGA CCGCATCTTC
AACTTCTCGG TAAGCATTCC TGACCGCCCT GGTGAACTCG CTAAGATTAC TCAAATTATT
GCAGAAGTGG GAGCTAATGT AGTTAAACTC GCCCACAACC AGTTTAAGAA CCTCTCACGT
TTCCGCGATA AAGAAGTGCT TATTACGGTA GAGACCAACG GTACCGACCA TATCCAGCAG
TTGGTAAGAG CTTTTAAAGA TAAAGGGTAC GAAATTACTG CTAAGTAG
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| Protein sequence | MNFTTAREHL KSVLLPTHLI YSPLFSEESD NKIYIKPENL QKTGAFKIRG AYNKILKLTE
EEKKKGVIAS SAGNHAQGVA YAARELGIKA VIVMPKTTPL IKVQSTKKYG AEVVLYGDVY
DDAYQKAKEL EEKEGYVFVH PFNDPDVLEG QGTIALEILE ELPNTDVIVV PIGGGGLISG
IACAAKQLKP DIKIVGVEPS GAASATEALK KNKLVSLPEA NTIADGTAVK RIGELNFEYI
KKYVDEVVTV DDYELTEVFL LLAEKHKLIA ENSGVLPLAA LKKLTDRGKN VVPVVSGGNI
DVLMISSMIG KGLVSRDRIF NFSVSIPDRP GELAKITQII AEVGANVVKL AHNQFKNLSR
FRDKEVLITV ETNGTDHIQQ LVRAFKDKGY EITAK
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