Gene Coch_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0907 
Symbol 
ID8367326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1056741 
End bp1057322 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content41% 
IMG OID644983332 
Productconserved hypothetical protein-like protein 
Protein accessionYP_003141023 
Protein GI256819744 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.497237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTCC TTGATATATT TTTAGGTTTA GCAGAACGCA TCTTTTGGTC GATGTGGATT 
TCTATCGGCT TTGCTTTATT GTTTAACACA CCACGTCGTG CTTTATGGAT AACAGGTGTA
TTAGGCGGTA TAGGGTGGGG TATTAAGTTC CTTCTATTAG CAACCTTAAT GCCCGAACAA
ATCGTGATTA CTTCTTTTCT GGGAGCTTGT GTGGTAGGGC TCTTAGCGGT GTATTTCGCC
CACCGTGTAC ACACACCTCC TATTGTGTTT ACCATCCCCG CCGTAATTAA TATGATTCCT
GGTAAATACG GCTATGAGTT TATGATGAAA ATCATACAAA TAGTAACCGT TGAAACCCCA
CAAGACGAAA CATTAGATTT ACTCTACCAA ACCTTTAAAC TCGGTTTACA AACAGGCTTT
ATTACTATGT GCTTAGCCTT TGGGGTGATT GCTCCTATGC TGTTATTTAA CACCTATTCG
GTAAAAGGTA AAGACCTAAA CGACCTCATC AAACGTCGCC TCTTGCGCAA GAAAGCTGAA
GGCAATTTAC CAAAGGAAGA AGTGGAGAAT GAACCGATAT AG
 
Protein sequence
MNFLDIFLGL AERIFWSMWI SIGFALLFNT PRRALWITGV LGGIGWGIKF LLLATLMPEQ 
IVITSFLGAC VVGLLAVYFA HRVHTPPIVF TIPAVINMIP GKYGYEFMMK IIQIVTVETP
QDETLDLLYQ TFKLGLQTGF ITMCLAFGVI APMLLFNTYS VKGKDLNDLI KRRLLRKKAE
GNLPKEEVEN EPI