Gene Coch_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0845 
Symbol 
ID8367264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1008211 
End bp1010433 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content44% 
IMG OID644983271 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_003140962 
Protein GI256819683 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT ACAACAGTAT TATTATAGGT AGTGGCTTGG GCGGACTCAT CGCTGGAGCT 
ACTTTGGCTC TCTGGGGCAA GAAGGTAATT GTGCTCGAAC AACACTATAT CGCAGGTGGT
TGTGCTACTG CTTTCAAACG TAAAGATTAC CTAATGGAAG TAGGTTTGCA CGAAATCGAC
GGATTGAACG AAACTGACCC TAAACGTCCT ATCTTAGAAC TTTTAGGGGT GTTTGAGGAA
GTAGAATTTC TAAAAGTACC CGAATTCTAC CATTTGAAGA AGCAAAACTT CCAGTGTACT
CTTCATCACG GGGCAGAAGC CAAAGCAAAA CTCATCGCCG ATTTTCCCGA TAGTAAAGTC
GAAATAGAAC GCTTTTTTGA ACTCATCAAT AGGCTTTACA CCGAAATGCG CCGACTCCCC
CGTAGCAAAT GGCTCAATAT ATTGCTCTAC CCGCTGATGC CTTTCTTGAT TCCTACCATC
ATCAAAACTT CTACAATGAA TGTGGGTAAA TGGCTCGATG CAAATATCAA AAATGAAGCA
CTCAAAAACG TACTCACGGC TAATTTGGGT TATTATACCG ATGACCCTTA TAACCTCTCG
CTGATGTACT TCCTGATGGC GCAAGGTAGC TATTTAAACG GAGGAGGCAA CTTCGTAAAA
GGGGGTTCAC AGTCGCTGTC TAACTACTTG GTGCGCTTTA TCGAAAAACG TGGCGGACAA
GTGCTTACGG GTAAATTCGT AGAAGAGATT TTAGTGGAAA ACAACCAAGC AGTGGGGGTG
AGCTATCGCG ATACGTTCAA CACTTCGGCG GCTAAGCAAT CGCTCTATGC CGATACCGTG
GTCGCCAATG CCGCCCAACC TATTGTAGCT CAAATGCTCC CCGAGCCTTA TCGCTCTAAA
TTAGCGCAAA AGGTAGCGCC TTTAGAACTC GCCTGCTCAC TGCTCACCAT CTATTTGGGC
TTCAATACCG ATTTGAAAAA ACTCGGCGTA AACCACTATT CTACCATCAT TCAAGGTCAA
AAAGATTATA AACTGAAAGA TGTAAAAGCC GATTCGCAGG GCGATTGGGC TCAAAAATCA
TTTACTTTTG TGAATTACGG AAGGATAGAT GCTCAGTTAG CTCCTGAGGG GAAGACGGTA
GCCGTGATTT GTGCCGTGGA TTACCTCAAA GAATGGGAAG GACTCAGCGA AGCGGAATAT
CAACAGAAGA AGGAAAGGGT CGCACAGCTG TTTTTAACCC GTTTAGAAGC CGAATTTCCT
ACTATTCTCG AATACTTGGA GTGTTATGAG GTAGCCACTG CCAAAACCAT AAAAAGATAC
ACTTTAAATC CGCAGGGCAC TCCGTATGGC TATGTGCAAT CGGTGAAACA AACCTACCCT
AAACGCGATA AACTCACCGC TTCACCGCTG AAAAACTTGT ACTTTGCCTC AGCTTGGGCG
CCTTCGGGGG GTGGCTATTC AGGGGCGATT TACAGCGGTT TTATGACGGC AAGCAAGATG
AAAACCCAAG TGAAATGGCA CAACTACCCA CCCTCAACTC TCGCCGATGA ACGCTGTGTA
AAACTCTTAG CAAAAGAATT TATCGCCCAT AATACTATCT TGCTCACTTT TGAAAAACCT
AAAGATTTGC AGTATAAAGC AGGACAGTAT GCCGTATTGA GGCTCAACAA CCCTCGTTAT
ACCGAATTGG ATATGCCTTT GCGCCCGCTC TCAATGGTCT CTCATCCTGA TGAAGATACT
TTGCAGTTTG CAATGCGCCT CAGCGATAGC AGTTTTAAGA AAAGTGTTGT CGAAATGGCG
ATAGGTGATA CAGCCACGAT ATTCGCTCCT ATGGGTAATT TCACTCTTAA AGGAAAAAAT
AAGCGCATTG TGTTCCTCGC CTCAGGCATT GGCATTACCC CCGTACTCCC GATGCTCAAA
ACATTAGAAC AACAGCAATT TGCAGGTGAA GTAGTAGTAT TTTACTCCAA TAAAACCGAA
GCCTCAGCTG CTTTTCACAA CGATTTACAG CATAGCACTT TGGCTAACTA TACCTATCTG
CCTGTGTTCA CCGCCACCCA AAAGCGCCTC AATACCGATT TTTTAAAGGA GCATCTCCAC
ACCCTCACCG ATTGTGACTA TTACATCGTG GGAACCAATA GCTTTACCAA AGCAATGCAA
GAGCTCTTGT TAAAAGAAAA CGTACCCGCC ACAACCATCT TTAAAGACGA TTTCGGAGGG
TAA
 
Protein sequence
MKNYNSIIIG SGLGGLIAGA TLALWGKKVI VLEQHYIAGG CATAFKRKDY LMEVGLHEID 
GLNETDPKRP ILELLGVFEE VEFLKVPEFY HLKKQNFQCT LHHGAEAKAK LIADFPDSKV
EIERFFELIN RLYTEMRRLP RSKWLNILLY PLMPFLIPTI IKTSTMNVGK WLDANIKNEA
LKNVLTANLG YYTDDPYNLS LMYFLMAQGS YLNGGGNFVK GGSQSLSNYL VRFIEKRGGQ
VLTGKFVEEI LVENNQAVGV SYRDTFNTSA AKQSLYADTV VANAAQPIVA QMLPEPYRSK
LAQKVAPLEL ACSLLTIYLG FNTDLKKLGV NHYSTIIQGQ KDYKLKDVKA DSQGDWAQKS
FTFVNYGRID AQLAPEGKTV AVICAVDYLK EWEGLSEAEY QQKKERVAQL FLTRLEAEFP
TILEYLECYE VATAKTIKRY TLNPQGTPYG YVQSVKQTYP KRDKLTASPL KNLYFASAWA
PSGGGYSGAI YSGFMTASKM KTQVKWHNYP PSTLADERCV KLLAKEFIAH NTILLTFEKP
KDLQYKAGQY AVLRLNNPRY TELDMPLRPL SMVSHPDEDT LQFAMRLSDS SFKKSVVEMA
IGDTATIFAP MGNFTLKGKN KRIVFLASGI GITPVLPMLK TLEQQQFAGE VVVFYSNKTE
ASAAFHNDLQ HSTLANYTYL PVFTATQKRL NTDFLKEHLH TLTDCDYYIV GTNSFTKAMQ
ELLLKENVPA TTIFKDDFGG