Gene Coch_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0822 
Symbol 
ID8367240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp984898 
End bp985854 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content32% 
IMG OID644983248 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_003140939 
Protein GI256819660 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.091848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAA GCGTTAAATT CATAGATTTA TTTGCAGGGG TAGGGGGCTT CCGCTATGCT 
TTGCAGAATA TAGGGGCTGA ATGTGTCTTT TCGTCAGAAT GGGACAAGTT CGCTCAGCAA
ACCTATAAGC TAAACTATGG AGAAGTTCCT TTTGGCGATA TTACTTTACA AGAAACGAAA
GATAATATTC CTAATGAATT TGATATACTT TGCGCAGGAT TTCCTTGTCA AGCATTTTCT
ATAGCTGGAT ATCAAAAAGG TTTTGAAGAT ATTAGGGGAA CACTTTTTTT TGAGATAGAA
GAAATAGTAA GGAAGCATCG TCCTAAGGTT ATTTTTTTAG AAAATGTAAA GAACTTAGTG
AGTCACGATA AGGGTAAAAC ATTTAAGGTA ATAACGAATA TCTTAGAAGA GAAATTAGGT
TACAAGATAT TTTATAAAGT CCTCAATACA ATGGAATATG CTAATATTCC ACAAAATAGA
GAGCGTATTT TTATAGTAGC TTTTGATCCT AAACAAGTTC CTAATTATAA AGAGTTCCAA
TTTCCTGAAA AAATTAAACT TACTAAAACG ATTCATAGCT TTTTAGAGAA AGGAAAACAG
AATGATTATT TTTATTATCA GCTATCTCAC AAATACAGTC CAGAACTTAT TAAAATAGTA
ACACGTAAAG ATACTATTTA TCAATGGAGG CGTGTGTATG TTCGAGAAAA TAAGAACAAT
GTTTGTCCTA CTTTAACAGC TAATATGGGT ACAGGGGGAC ATAATGTACC GATTATTAAA
GATAATTTTG GTATTAGGAA GTTAACCCCA CGAGAATGTT TTAATTTTCA AGGTTATCCA
AAAGGCTTTA TACTTTCTAA AGAAATAGCT ATATCAAAAT TATATATGCA GGCAGGGAAC
TCTGTGACAA TGCCTTTAAT TCAAAGAGTA AGTGAACAAA TTTTGAAAGT GTTATGA
 
Protein sequence
MGKSVKFIDL FAGVGGFRYA LQNIGAECVF SSEWDKFAQQ TYKLNYGEVP FGDITLQETK 
DNIPNEFDIL CAGFPCQAFS IAGYQKGFED IRGTLFFEIE EIVRKHRPKV IFLENVKNLV
SHDKGKTFKV ITNILEEKLG YKIFYKVLNT MEYANIPQNR ERIFIVAFDP KQVPNYKEFQ
FPEKIKLTKT IHSFLEKGKQ NDYFYYQLSH KYSPELIKIV TRKDTIYQWR RVYVRENKNN
VCPTLTANMG TGGHNVPIIK DNFGIRKLTP RECFNFQGYP KGFILSKEIA ISKLYMQAGN
SVTMPLIQRV SEQILKVL