| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0765 |
|---|
| Symbol | |
|---|
| ID | 8367183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 923655 |
|---|
| End bp | 925919 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644983192 |
|---|
| Product | malic enzyme |
|---|
| Protein accession | YP_003140883 |
|---|
| Protein GI | 256819604 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
|---|
| TIGRFAM ID | [TIGR00651] phosphate acetyltransferase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0423248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAA GAAAAAAAGA AGAGGCACTA CATTATCACG AGTTTCCACA ACCTGGTAAA
ATCGCTATTG TGCCTACCAA AAAACATTCT ACACAACACG ACCTCGCGTT GGCTTACTCT
CCTGGAGTAG CCGAACCTTG CTTGGCAATT GCCGAAGATA AAAGCAACGC CTATAAGTAT
ACTGCCAAGA GCAACCTCGT AGCCGTAATT TCCAACGGTA CTGCCGTGCT CGGTTTAGGC
GATATAGGTG CTGAAGCCTC TAAACCTGTA ATGGAAGGAA AGGGTTTGCT CTTCAAAATC
TTTGCAGGTA TCGATGTGTT CGACATCGAA GTAGATGCTA CCGATGTCGA TAAGTTCGTA
GAAACCGTAA AAGCTATTGC TCCTACCTTC GGGGGTATCA ACCTCGAAGA TATCAAAGCA
CCTGAGGCTT TCGAGATTGA ACGTCGCCTA AAAGAGGAAT TGGATATCCC TGTAATGCAC
GACGACCAGC ACGGTACAGC TATCATCTCG GCAGCAGCTC TTGTCAATGC CTTAGAAATA
GTAGGTAAGG ATATTGCCAA AGCGCAGATA GTAGTAAATG GCGCAGGAGC CGCTGCTATT
TCTTGTACAC GCTTGTACGT GGCTTTGGGT GCCAACCCTA AGAACATCGT AATGTGCGAC
AGTAAGGGTG TGATTCGTAA AGACGCTCCT AACCTCACCG AACAAAAAGC CGAATTTGCT
ACCGACCGCA ACCTTCGCAC TCTCGAAGAA GCGGTAAAAG GTTCTGATGT GTTCATCGGT
CTTTCTAAGG GAGATGTACT CACCCCCGAG ATGTTGCTCT CTATGAATAA GGACGCTATT
GTATTTGCAA TGGCAAACCC TATTCCTGAA ATCGATTACG ATTTGGCTAT CCAAACCCGC
AAAGATATCA TTATGGCAAC AGGTCGCTCC GACTTCCCTA ACCAAGTGAA CAACGTGCTC
GGTTTCCCTT ATATCTTCCG CGGAGCGTTG GACGTTCGCG CTACTAAAAT CAACGAAGAG
ATGAAACTCG CTGCGGTACA TGCTATCGCC GATCTTGCCA AGAAAACTGT ACCTCAGCAA
GTAAGTTTGG TATACGGAGG TGAAAATCTT GCCTTTGGTC GTAACTATAT TATTCCTAAA
CCGTTCGACC CTCGTTTGAT ATACGAAGTA CCGCCCGCTA TTGCCAAAGC CGCTATGGAA
TCAGGTGTAG CACAAAAACC TATTACTAAC TGGGAAGCCT ATAAAGGCGA ACTAATGGAC
AGGATTGGTG TAGGTAGCAA AGAAATACGC CTATTGCAAG ACCGTGCCAA ACGAAATCCT
AAACGCGTAG TATTTGCTGA AGCCGACCAA ATAGAAGTGC TTAAAGCTGC TCAACGCATT
TATGAAGATG GTATCGGTAT TCCTGTGCTT TTGGGTAATA AAGAAGTGAT AAAAGCGCTC
AAATACGAAA TAGGTTTCAC CGGTCGTGTA GATGTAATCG ACCCCAAAAG TGATGCCGAA
AAAGCACGTC GTGAGAAGTT TGTAAAGCAT TATTGGAAAC TGCGCGAACG CCGTGGTATC
ACCTACGAAG TAGCCGAACG CCTAATGCGC GAGCGCAATT ACTTTAGTAC GATGCTCGTA
GAAACCGGTC AAGCCGATGC AATGATTACT GGTTACTCTC ACGCTTATCC TAATGCGATT
CGTCCGGCAC TCGAAATCAT TAAAAAGGAC GAAGGTGTAG AGCGTATCGC TGCCACCAGC
ATTATGCTCA CCAAACAGGG GCCTTTATTC CTTTCAGATG CTACTATCAA TATCGACCCT
ACTGCCGAAG AGTTGGCTAA CATCGCCTTG CTTACCGCAC GTGCCGTGAA GTTCTTCGGC
TTAAAACCTT CGGTAGCGAT GTTGTCGTAT TCTAACTTTG GTTCGGCAGT ATCCGAAAGT
AGCCTGAAAG TGCGTCAGGC AGTAGCTTAC CTCCACAAGC ACCACCCCGA TTTAGTAGTC
GATGGTGAAA TCCAAGCCGA TTTTGCTCTC AATCCTGAGA AGATTGCTAA GACCTATCCG
TTCTCTAAGC TCAACAAGGG CAAAGGGGCT AATGTACTCA TCTTCCCTAA CCTCGAAGCG
GCGAATATCA GTTACAAGCT CCTCAAAGAA ACCCAACACT TAGACACCAT AGGCCCTGTG
ATTTTAGGTC TTTCTAAACC TATTCACATC ACCACTATCG GTTCTACTGT CGACGAAATG
GTAAATCTCG CTACCCTTGC AATAATTGAC GCTCAACAAA AATAG
|
|---|
| Protein sequence | MDQRKKEEAL HYHEFPQPGK IAIVPTKKHS TQHDLALAYS PGVAEPCLAI AEDKSNAYKY
TAKSNLVAVI SNGTAVLGLG DIGAEASKPV MEGKGLLFKI FAGIDVFDIE VDATDVDKFV
ETVKAIAPTF GGINLEDIKA PEAFEIERRL KEELDIPVMH DDQHGTAIIS AAALVNALEI
VGKDIAKAQI VVNGAGAAAI SCTRLYVALG ANPKNIVMCD SKGVIRKDAP NLTEQKAEFA
TDRNLRTLEE AVKGSDVFIG LSKGDVLTPE MLLSMNKDAI VFAMANPIPE IDYDLAIQTR
KDIIMATGRS DFPNQVNNVL GFPYIFRGAL DVRATKINEE MKLAAVHAIA DLAKKTVPQQ
VSLVYGGENL AFGRNYIIPK PFDPRLIYEV PPAIAKAAME SGVAQKPITN WEAYKGELMD
RIGVGSKEIR LLQDRAKRNP KRVVFAEADQ IEVLKAAQRI YEDGIGIPVL LGNKEVIKAL
KYEIGFTGRV DVIDPKSDAE KARREKFVKH YWKLRERRGI TYEVAERLMR ERNYFSTMLV
ETGQADAMIT GYSHAYPNAI RPALEIIKKD EGVERIAATS IMLTKQGPLF LSDATINIDP
TAEELANIAL LTARAVKFFG LKPSVAMLSY SNFGSAVSES SLKVRQAVAY LHKHHPDLVV
DGEIQADFAL NPEKIAKTYP FSKLNKGKGA NVLIFPNLEA ANISYKLLKE TQHLDTIGPV
ILGLSKPIHI TTIGSTVDEM VNLATLAIID AQQK
|
|---|
| |