Gene Coch_0721 details

Gene Information

• Locus tag: Coch_0721
• ID: 8367138
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 877456
• End bp: 877911
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 644983147
• Product: ribosomal protein L13
• Protein accession: YP_003140839
• Protein GI: 256819560
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACACAT TAAGCTACAA AACCATCTCT GCCAATAAAG CCACTGTAAA TAAAAAGTGG 
GTCTTGGTAG ATGCTGATGG ACAGACTTTG GGTCGCCTTG CCTCTAAAGT AGCCAAGCTA 
CTTCGCGGTA AGTACAAACC CGAATTTACC CCTCACGTTG ATTGTGGTGA TAACGTAATC 
GTTATCAACG CCGAGAAAAT CAACCTTACA GGGAACAAAT GGGAAGATAA ATCTTATCTT 
CGCCACACTG GTTACCCAGG AGGACAACGC TTCACAGGAG TAAAACAACT CCTCGACAAA 
CACCCAGAAC GTATCATCGA AAAAGCTGTA AAAGGTATGT TGCCAAAAAC AAGATTGGGT 
GCAGCAGTTT TACGTAATTT AAAAGTGTAT GCAGGTACCG AGCACAAACA AGAAGCTCAA 
CAACCTGTTA CCATTAACTT AAACGATTTG AAATAA 

 

Protein sequence

MDTLSYKTIS ANKATVNKKW VLVDADGQTL GRLASKVAKL LRGKYKPEFT PHVDCGDNVI 
VINAEKINLT GNKWEDKSYL RHTGYPGGQR FTGVKQLLDK HPERIIEKAV KGMLPKTRLG 
AAVLRNLKVY AGTEHKQEAQ QPVTINLNDL K