Gene Coch_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0680 
Symbol 
ID8367097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp836107 
End bp837021 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content28% 
IMG OID644983107 
Productrestriction endonuclease 
Protein accessionYP_003140799 
Protein GI256819520 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAC CTGATTTCCA ATCCTTTTTT TATCCTACTT TTTTAATGAT AAAAGATAAA 
AAGGAGTATT CTATAGATGA GCTAAGAAAC TTCTTAACAA AGTATTTTAA ATTAACGGAG
GATGATAAAT CTGAAAAAGT ACCAAGTGGT ACTCAAACAA AATTCAACAA TCGAATTTAT
TGGACAAAAA GTTATTTTAC AAAAGCAAAT CTTATAGAAT CTACTAAACG ATCTCATTTT
AAGATTACTA AAAAAGGTGT TGAGTTCTTT AATAAGTTAG AAAACAACAA AAAAATCACA
ATTAAGGATT TAGAGAATAT TCCTGAATTC CATAGTTTTA AGTATGGAGA TTCTTTAAAT
CAATTAAGTA TAGAAGAAAA TCTAATAGAA GATAAAACAC CTTTTGAAAG ACTAGAAGAT
ATTCATCAGC TGTTACAAGA TGAATTAGCT CATGAGTTAT TGATAAAGGT TCGTGAAAAT
TCTTGGCAAT TCTTTGAAGA TTTAGTTATA GACCTAATGG TAAAAATGGG ATATGGAGGA
GCAAAAAGTA GAAAAGGAAA TTCTGTAAAA AGAACAAATG ATGAAGGAAT AGATGGCATA
ATTAATGAAG ATAAGTTAGG GTTAGAACTT ATCTATCTAC AAGCTAAAAA ATGGGATACA
GAAACTACAA TAGGAAGACC TGAAGTTCAA AAGTTTGTAG GAGCTTTACA TGGACAAAGA
GCAAAAAAAG GAGTTTTTAT CACAACAAGT AAATTTTCCG ATAATGCTTA TGAATATGTG
AAGACAATTG ATCCAAAAGT TGTTCTTATT GATGGAAAAA CGCTTACTAA ACTTATGATT
GAATATGAAA TAGGAACAAC AGTTGTAGAA AATTATCAGG TGAAAAAAAT TGATACTGAT
TACTTTGAAA AATAA
 
Protein sequence
MALPDFQSFF YPTFLMIKDK KEYSIDELRN FLTKYFKLTE DDKSEKVPSG TQTKFNNRIY 
WTKSYFTKAN LIESTKRSHF KITKKGVEFF NKLENNKKIT IKDLENIPEF HSFKYGDSLN
QLSIEENLIE DKTPFERLED IHQLLQDELA HELLIKVREN SWQFFEDLVI DLMVKMGYGG
AKSRKGNSVK RTNDEGIDGI INEDKLGLEL IYLQAKKWDT ETTIGRPEVQ KFVGALHGQR
AKKGVFITTS KFSDNAYEYV KTIDPKVVLI DGKTLTKLMI EYEIGTTVVE NYQVKKIDTD
YFEK