Gene Coch_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0659 
Symbol 
ID8367076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp811763 
End bp812395 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content45% 
IMG OID644983086 
ProductRadical SAM domain protein 
Protein accessionYP_003140778 
Protein GI256819499 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.917391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAACA AAGATACACA GATAGCTTTG CAGAAGGGGG AGCTCCTCCC CCTGATGGAG 
GCTTTTTATA CCTTACAAGG CGAAGGTTTC TACAAAGGAA CAGCCGCTTA TTTCATTCGC 
TTAGGCGGTT GTGATGTAGG CTGTCATTGG TGTGATGTAA AGGAAAGTTG GCAAGCCGAA 
GCTCACCCCT TAGTGCCCGT AGATACCATT GTAGCCGAAG CCTTAGCACA CTCCAAAACT 
ATCATTATTA CAGGGGGTGA ACCACTGATG TGGAACTTAA CTTTACTTAC CGAAAAACTG 
AGAGCAGGAG GTGCTCGCAC TCATATAGAG ACCTCAGGAG CACACCCGTT ATCAGGCTCT 
TGGGATTGGA TATGCCTATC GCCTAAAAAA ATAAAACGCC CCGTAGGAGA CGTTCTTCAA 
AAAGCTAATG AGCTCAAAAT GGTAATCTAT AACAATCACG ATTTTATTTT TGCCGAAGAA 
ATGGCAGCGC AAGTATCGCC TGAGTGCTTA CTTTACCTCC AACCCGAGTG GAGCAAACGC 
GCTGAGGTAA TGCCTAAAAT TGTAGATTAT GTAATGGCTC ACCCTCAGTG GAAAGCCTCT 
TTACAAATGC ATAAATACCT TGACATTAGG TAA
 
Protein sequence
MLNKDTQIAL QKGELLPLME AFYTLQGEGF YKGTAAYFIR LGGCDVGCHW CDVKESWQAE 
AHPLVPVDTI VAEALAHSKT IIITGGEPLM WNLTLLTEKL RAGGARTHIE TSGAHPLSGS 
WDWICLSPKK IKRPVGDVLQ KANELKMVIY NNHDFIFAEE MAAQVSPECL LYLQPEWSKR 
AEVMPKIVDY VMAHPQWKAS LQMHKYLDIR