Gene Coch_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0642 
Symbol 
ID8367059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp797851 
End bp798816 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content42% 
IMG OID644983069 
Producthypothetical protein 
Protein accessionYP_003140761 
Protein GI256819482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000416196 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTAT TACAAGCGAT TATAAAGATA GGTGATTACA CTTTTAGAGC AGTACATAAC 
GTTAAAATCA CCAAATCGGT AGACGAATTG GCGGACACCT GTACGATTGA ACTGCCAACC
CATTTTAAAG TAGCCAAAGG GGGCGAAAGC CTTTATACTG AAAAGGCTAT CAAGGTGGGT
GACAAAGTGA GTGTTACCCT TGCTTATGAG GGTGTGTATA GCGGAGTGGA GTTTGAAGGC
TATGTAAAGA AGGTTAAACC GAGCATTCCT GTAAGCATAG AGTGTGAAGA CGCTATGTAC
TTACTTAGAC GTAAAAATAT CAGCAAGTCG TGGCAAAAAA CAACACTTAG AGAAGTATTG
CAGGAAGTTG TGAAGGACAC GCCCATTGTG CTGGCGGACA ATATTCCAGA AATACAGTTA
GACCAGTGGA TTATTCGCAA TGCGAACGGT ACGCAGGTAT TGGAGAAGCT GAAAGAAGAG
TTTAGGCTAA GCGTGTTTAT CAATGATGAA GGCAAGCTGT ACGCAGGACT TTCAGAGCTT
ACCAATATAG GGCAAACGGC ACGCTATGAC CTCAATTATA ACATTGTTGC CAATGATTTG
GAGTATAGGA CTAAGGAGGA ACGCAAACTG AAAGTACGTT ACACTTATAT CGACAAAAAT
AACAAAAAGA AAACAGTGGA AGAGGGCGAC CCCGAAGGTG AGCTAAGAAC CTTTCATACT
TCGGTAGTGA GTGAGGAACC TAAGTTACGA GAAATGGCAA GAGCGGAGAT GGAAAGGCTG
AAATACGATG GCTTTGACGG CTCTATAACA AGTTTCTTGG TACCTTTTGC GACGAGGGGT
ATGCAAGCTC ATATGATAGA TGATGAATTG AAAGAGATAG ACGAACGTTA CTTTATTAAG
AAAGTAGAGA TTACCTTCGG ACGTAATGGC GCACGTCGAC AAGTAACCAT AGGAGCAAAA
TTATGA
 
Protein sequence
MFVLQAIIKI GDYTFRAVHN VKITKSVDEL ADTCTIELPT HFKVAKGGES LYTEKAIKVG 
DKVSVTLAYE GVYSGVEFEG YVKKVKPSIP VSIECEDAMY LLRRKNISKS WQKTTLREVL
QEVVKDTPIV LADNIPEIQL DQWIIRNANG TQVLEKLKEE FRLSVFINDE GKLYAGLSEL
TNIGQTARYD LNYNIVANDL EYRTKEERKL KVRYTYIDKN NKKKTVEEGD PEGELRTFHT
SVVSEEPKLR EMARAEMERL KYDGFDGSIT SFLVPFATRG MQAHMIDDEL KEIDERYFIK
KVEITFGRNG ARRQVTIGAK L