| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0605 |
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| Symbol | |
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| ID | 8367022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 757650 |
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| End bp | 759062 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644983032 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003140724 |
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| Protein GI | 256819445 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT ATACTTTACT TTGCCTCTTC GTTATAGGGA TAACAGCTTC ATTACGAGCG
CAATCGCTCT CATTCGACGA AGCACTTAGC CAAATGCGTT CAGGCAACCA AAAACTCAAA
GGCATCGAAA AACAAACTGA AGCAGCCGAT TATAATCGCA AGTCATTCCG TGGGCTTTAT
CTGCCCCAAC TGAGCCTTAA CGCTAGCTAT ATGCACCTCG CCGACCCGCT TTCGTTGAGC
TTTAACGAGT ATAAGGCGCC TTTACAAAGT GGCTTACAGG GATTTGCAAC CCAAGTGCCA
GCCCCTATGC GTCCGCTACT TACCCCCCTA CTTGGCAGAA TACAACCACT TTTTGCCCAA
GACTGGCGCT ATGAGTTCCA AAAACAAGAC ATTTGGAAAG TAAGCGCCGA TGCCAAATGG
GTGCTTTTTG CTGGTGGAAA GGTGCGTGTA GGGAATCGTG TGAGTGCACT CAACACCGAA
ATAGCCACCG TAGAGAGCAA AAAAACCGAA AATGCCCTCA TCAGTGAGTT GGCGGAACGT
TATTTTCAAG TACAGTTAGC CCAAAAAGCG TTGGAAGTGA GAAAACAGTC GTTTGAAACA
GCGCAACATC ACTATGAGAA TGCCCAAAAG CTCGAAAAGA ACGGAATGAT AGCTTCCGTA
GAAACAATGC AAGCCAAAAA AGCCGTTACC GATGCCCAGC GTGAGGTGAT GGCTGCTGAA
AAGGATATAC AATTAGCGCA AACAGCTCTC TATGGCGTAA TGGGCACTAC CGAGCAACCG
CTCACAGCCC TCACCACCGA ACTCTTTGAA GTAGCCCCTC TCCAATCGCT TGAGTACTAC
CAACAGCAAG CCAAAGAACA CTACCCTATG ATTGTGCAAG CCAAACTGAA AGCCCAAATG
GCTACCCAAA GCGTAAAAGC GCAACAAGCC GCTTATTTGC CCGATGTAGC CGTAGTAGGC
AAAAAGTATT TGTGGAGCGA AAATCTACCT TTAACCGAAC CCGATAACTG GGTAGTAGGT
GTAGGGTTAC AGTGGAATCT CTTCAACGGT TTACAGGACA AAAACAAGAT AGCCCAAGCC
AAAGCGATGC GCGAGAGTGT GGAGCTCATC ACTGCACAAG CCGAAAAAGA TGTACAAACC
TTAGTGAAAA AACAGTACAC CGAGATTGAA AAGCAACGTG AACAATACCT CAGCTTAGAA
GAGAGTTTGC GTTTTGCCGA AGAGCTCGTA CGTGCCCGCG ACAAAGCTTT TGCCGAAGGT
CTCTCCACCT CCACCGATGT AGCCGATGCC AACCTTTATT TGGCTTCTAT TAAAATCAAA
CGCTACCAAG CCCTTTTTGA AATGGACAAA ACTCTCGCTC AGCTGTTAGA AACCTGCGGA
ATGAGTGATA AATTCAGCGA ACAAGTAAGG TAG
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| Protein sequence | MKKYTLLCLF VIGITASLRA QSLSFDEALS QMRSGNQKLK GIEKQTEAAD YNRKSFRGLY
LPQLSLNASY MHLADPLSLS FNEYKAPLQS GLQGFATQVP APMRPLLTPL LGRIQPLFAQ
DWRYEFQKQD IWKVSADAKW VLFAGGKVRV GNRVSALNTE IATVESKKTE NALISELAER
YFQVQLAQKA LEVRKQSFET AQHHYENAQK LEKNGMIASV ETMQAKKAVT DAQREVMAAE
KDIQLAQTAL YGVMGTTEQP LTALTTELFE VAPLQSLEYY QQQAKEHYPM IVQAKLKAQM
ATQSVKAQQA AYLPDVAVVG KKYLWSENLP LTEPDNWVVG VGLQWNLFNG LQDKNKIAQA
KAMRESVELI TAQAEKDVQT LVKKQYTEIE KQREQYLSLE ESLRFAEELV RARDKAFAEG
LSTSTDVADA NLYLASIKIK RYQALFEMDK TLAQLLETCG MSDKFSEQVR
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