| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0604 |
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| Symbol | |
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| ID | 8367021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 756428 |
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| End bp | 757408 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644983031 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003140723 |
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| Protein GI | 256819444 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AAAACATCAC CGGTCTTATT GTAACAATCA CTGTATTTGC AGTAGTTCTT
ATTCTTTCTA TCTACTTTTT TAGTAACCGC GAACCTGTAT ATTTGCAAGG ACAAGTAGAA
GCCAAACAAA TCAACGTTGC CCCCAAAGTA CCTGGTAGGG TGAAAGCTAT CTACAAGCAG
GAAGGCGACC AAGTGCACAA AGGCGACCTC CTTTTAGAAC TCGAAAGCAC TGAACTCGAT
GCCAAACTCT CTCAAGCCGA AGCGGCACGT TTGGCAGCAC AAGCTCAATC CGATAAAGCA
CAACGCGGTG CCCGCAGCGA ACAAATTCAA GGGGCTTACA ATGTATGGCA ACAAGCCGAA
GCGGCTGCCC AGCTCGCTGA AAAAACCTAT CAGCGTGTGA GCAACCTTTA TAACGATAAG
GTATTGCCTG CTCAAAAGAA AGATGAGGCT TATACCCAAA TGGTTGCCTT ACAAAAACAA
GCGGAAGCAG CCAAATCACA ATACGAAATG GCGAAAAACG GAGCTCGTGT AGAGGATAAA
ACCGCTGCCC GAGCCCTTGT AGCCCAAGCG CAAGGGGTCA TTACTGAGGT AAATGCCTAT
AAAGATGGTG CTAAAGTGTT TGCCCCTGCC GATGCCGAGA TACAAACCAT TATCCCCAAC
GAAGGCGAAA TCGTGAATGC GGGTTACCCT GTGATGAACC TCATCGATAC CCAAGACGAG
TGGGTGGTGT TCAACATACG CGAAGATAAA ATGGCAGACT TCAAGATAGG CACTAAATTC
AAAGGCATCG TACCCGCCCT TGGCAATCAG GAGATAGAGT TGGAAGTAAA ACACATAGCC
GTACAAGCTG ATTTCGCCAC TTGGACAGCT ACCAAGAGCA AAGGCGACTT CGACAAGAAA
ACTTTCGCTA TCAAAGCCTA CCCTACCCAA AAAGTAAAGG ATTTAAGACC CGGAATGTCA
GTATTAGTAA GTGAAAAATG A
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| Protein sequence | MKKKNITGLI VTITVFAVVL ILSIYFFSNR EPVYLQGQVE AKQINVAPKV PGRVKAIYKQ
EGDQVHKGDL LLELESTELD AKLSQAEAAR LAAQAQSDKA QRGARSEQIQ GAYNVWQQAE
AAAQLAEKTY QRVSNLYNDK VLPAQKKDEA YTQMVALQKQ AEAAKSQYEM AKNGARVEDK
TAARALVAQA QGVITEVNAY KDGAKVFAPA DAEIQTIIPN EGEIVNAGYP VMNLIDTQDE
WVVFNIREDK MADFKIGTKF KGIVPALGNQ EIELEVKHIA VQADFATWTA TKSKGDFDKK
TFAIKAYPTQ KVKDLRPGMS VLVSEK
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