Gene Coch_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0588 
Symbol 
ID8367005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp737982 
End bp739565 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content32% 
IMG OID644983015 
ProductEco57I restriction endonuclease 
Protein accessionYP_003140707 
Protein GI256819428 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.274467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCCT CTCAGAAGAA AAATAGTAAG AATAAATATG GTCAGTACTT TACTCCTAAA 
GTAGTGGCTG ACTTTATGGT GGGCTTAGCT AACATTTCCC CTAATACCAA AGTGTTGGAG
CCTGCTTGTG GTGAAGGTGT ATTTTTATCG CTTTTACAAG AAAAAGGTAT AAAAAATATT
ACAGCTTTTG AGATAGATAC AGCATTAGCT CACTCATTCC ATTTTGTACG TCATGAAAGT
TTTGTGTCAG CTCATCTTAC TGAAAAGTAT GATTTGATAA TAGGAAATCC TCCTTATATC
CGTTGGAAAA ACTTGGAAGA AGAACTAAAA ATAGAATTAT CACAAAGCTC TCTTTGGAAT
AAATACTGCA ATTCACTCTG TGACTATCTT TATATCTTTA TTCTCAAATC AATAGAGTTA
CTTAACGAAG GAGGACAGCT TATCTTTATT TGTCCAGAGT ATTGGTTGAA TACCACTCAC
TCCCTATCTT TGCGTAATGA GATGATGAAC CACGGCTATT TTGAAGAATT GTATCACTTC
AACGAAACAC CTATCTTTGA AGGTGTAACA GTTTCTGTTA TTATTTTTAA ATACATAAAG
AGCAAACATA GAAAAAATGT TATAAAAGTA TCTAAATATC ACAGCAAACA AAAATTAACA
ACTGAGAAAC TTTTTAATTT ACAATATCAA ATTCCTTTTG AAAATGCTGA ATATATAAAA
GTGCCTCAAT TTGATCTCAA TGAACGTTGG CTTTTAGAAA GTAAAGAGGT ACAAGCAGAG
TTACGAACTT TAGAATTAGC CTGTGAAAAA GAATTTGCTG ACTTATTGTT TAATGAGAAA
ACTCAATATC ACACTTTAGG TGAATACTGT GATATTGGCA ACGGGTTAGT GAGTGGGTTG
GATAAGGCTT TTCAAGTAAA TGGTCACTCT CTAAACAAAG CAGAGCAATC AGCAACTATC
AAAGTAGTAA AAGCTAAAGA TATAACACCT TTCTTAGCTG AAGTTATTAC AAGATACATC
TATATTGAGG AAGGGCTTAC GGAAGAGCGT TTTAAAGAAC TTTATCCCAG TTACTATTTA
CATTTTCAAC CCTATAAAGT GAACTTACAG CAACGTTACC AATACAATCG CAAAATTAAC
TATTGGGAAT GGGTTTTTCT TAGGAACTTT CATTTGTTTA GTAAACCTGA AAGTCGAATT
TTTGTGCCTT GTAAAGAAAG AATTTCTAAT AAGAATTATT TTCGTTTTGC CTTAGTAGCA
CAAGACATCT ATCCCACTCA AGATGTAACG GCTATTTTTA AAAAACAACA CACACAAGAA
AGTATAGAAT ATATTTTAGC TTATCTCAAT CAGCCTATTA TATTTGATTG GCTCAAGAGT
AATGGGGTAG TAAAAGGTAG TATTGTAGAG TTTTCAGAAA AACCTATTGC AAGTATTCCG
TTTAGGAAAA TTGACTGGAA TAATGAAAAA GAAGTACAAC AACATCATAT CATCACCGAT
GTTACTAAAC AATATCTAAA AACTAAAAAC AGCTTACAAC TTACCCACAT TAAAACATTG
TTTAACCAAC TCTTAAATAT CTAA
 
Protein sequence
MTPSQKKNSK NKYGQYFTPK VVADFMVGLA NISPNTKVLE PACGEGVFLS LLQEKGIKNI 
TAFEIDTALA HSFHFVRHES FVSAHLTEKY DLIIGNPPYI RWKNLEEELK IELSQSSLWN
KYCNSLCDYL YIFILKSIEL LNEGGQLIFI CPEYWLNTTH SLSLRNEMMN HGYFEELYHF
NETPIFEGVT VSVIIFKYIK SKHRKNVIKV SKYHSKQKLT TEKLFNLQYQ IPFENAEYIK
VPQFDLNERW LLESKEVQAE LRTLELACEK EFADLLFNEK TQYHTLGEYC DIGNGLVSGL
DKAFQVNGHS LNKAEQSATI KVVKAKDITP FLAEVITRYI YIEEGLTEER FKELYPSYYL
HFQPYKVNLQ QRYQYNRKIN YWEWVFLRNF HLFSKPESRI FVPCKERISN KNYFRFALVA
QDIYPTQDVT AIFKKQHTQE SIEYILAYLN QPIIFDWLKS NGVVKGSIVE FSEKPIASIP
FRKIDWNNEK EVQQHHIITD VTKQYLKTKN SLQLTHIKTL FNQLLNI