| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0540 |
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| Symbol | |
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| ID | 8366952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 680098 |
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| End bp | 680967 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644982962 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003140659 |
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| Protein GI | 256819380 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.516999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCA TTACTCATAA CGATTACACT CAGCGTATCA ACAAAGTGGC GGAATATATC
AATGGTCATC TCGATACTTC TATAAAGATA AAAACACTCG CCAATGTGGC TAACTTATCT
GATTTTCATT TTTGTCGCAT CTTTAAAGCA CTTAAAGGAG AATCGCCCAT TGCCTTTATT
GCTCGTTTGC GCATAGAAAC GGCAGCTCAG CTGTTACGCT ATTCGACGCT TTCGGTAGAA
GAAATAGCTT TTAATATAGG GTATGAAACG CCCGCCTCTC TTTCCAAAGC GTTTAAAAAT
CAATATGGTA TTACGCCTAC TCAGTATAGA ACGAACAGAG ATATTTATAT TATGAAGAAA
GAAATAAACA ATCCAGAAGT AGTGCTCAAA GCTCCAAAGA TAGTAGAGCT TGAGCCCAAA
AGTCTTATTT ACGTAGCTCT TACAGGAGAA TATGGTACAC TTAACTACAA CAAAGCTTAC
GAACAATTGT GGGGTGTTGT AAAATCGCAA AAACTCTTTA CCAAAGGCAT TGAGTCGATA
TGTGTTTCGT ATGACGACCC TAAAATTACC GAAGCCTCTT TGCAACGTTC CGAGGTGAGT
TTGGCTATTC ACAAGCCGGC TAAACCCTCA GGTGAAGTAA GTTGCAAAAC CTTAGCAGGA
GGCAAATATG CAGTCTTTTT CTATCAAGGT AGTTATACTC AGCTCTCATC CGTCTACGAT
GCTGCGATGC GCTGGGTGGT AGATAGTGAA TACGAAGTGC GCGATGAGCC TATGTTCGAA
AAATACCTCA ACGACTGCCG TCGTACCCCC GAAGGAAAAC TGAAAACTGA GATATATATC
CCAGTGCAAA CTGCACGGGC AATTTCCTAA
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| Protein sequence | MKSITHNDYT QRINKVAEYI NGHLDTSIKI KTLANVANLS DFHFCRIFKA LKGESPIAFI
ARLRIETAAQ LLRYSTLSVE EIAFNIGYET PASLSKAFKN QYGITPTQYR TNRDIYIMKK
EINNPEVVLK APKIVELEPK SLIYVALTGE YGTLNYNKAY EQLWGVVKSQ KLFTKGIESI
CVSYDDPKIT EASLQRSEVS LAIHKPAKPS GEVSCKTLAG GKYAVFFYQG SYTQLSSVYD
AAMRWVVDSE YEVRDEPMFE KYLNDCRRTP EGKLKTEIYI PVQTARAIS
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