Gene Coch_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0518 
Symbol 
ID8366930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp655817 
End bp656932 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content41% 
IMG OID644982942 
ProductCellulase 
Protein accessionYP_003140639 
Protein GI256819360 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA ATATTATTTT AACGTATGTT TATCTCATCA TTGTGATATC TTTCGCAATC 
ATCTCTTGTA ACAAAAACAG TAACACTGAA GAGATTCTAC AAAAAGAAAA TCCTAAAAAA
GAGAACCCTA AAAAGGAAGA ACCTAAAAAA GGAGACAGTT CTTTATTAGC TTATTCCAAG
CCTTTCTATC TCTTTACTGA AACTAAGGCT TATGAAATGA CTAAGCAAGA AAAAGACCCT
TACTTAAAGA AACTCTATTA CCAAATAGCC GCTACTCCCA CAGCTGAATG GTTCGAAGGC
GTAGAAGCCT TCGACGATAC TACCTTAAAA CGCCTCATCG AAGGCGCAAA GGCACAACAA
AAAACACCTA TCATCACACT CTACGGCATT CCTTATAGAG ATTGTGGTTC GTATTCAACT
GGAGGTCATA AAACGGCTAC TTCTTATAAG GCGTGGATAG ATCGCACCAG TGCTATTATT
GGCAAAACCC CTATAATAGT GATTGTAGAA CCCGATGCCC ATAACTTTTG TTTAAAGAAA
GGCTGGAAAT ACAACGATGC AAAATACAAA GAACGCGCTG AACTCCTCAC TTATGTAGGA
AAGACTTTTG CTGATAACAA CCCGAATGCG TTGTTGTATT TGCATATTGG CGGAACAGAA
CTCAAACAAG AAGAAGCTGC CCAAGCGGTA ATAGATGGCG GTATCCGGTA TATGCGTGGC
TTTGTTACCA ACGTCGCCGA CCACAGAGGG ACTCCTCGGG CTGAAAAGTG GAGCGAAGAG
TTCGTACAAA CGCTCCAAAA GAAAAACTTA GGCACAAAAT ACTACGTGAT AGACACCTCC
CGCAATGGTA TCGATAGCCC TAAACAAACC AATAAAGCTT ATTATTACAG TTGTAACAAT
TTCAATGCCG CTTTAGGAGT ACGCCCTACC ACCAAAACCT CTGCTCCTCA CGCCGACGCT
TATTTGTGGA TTAAACATCC TGGCTTATCC GATGGTACTT GTGCCAATGG CGATCCTAAG
GCAGGCTCTT GGTATCCCGC AGTAGCAAAA TCATTAGTGC AAAAAGCTAT TGAAAAAGGA
ATTATAGAAG AGTGGAAAGT CCCTAACAAC TTTTAA
 
Protein sequence
MKKNIILTYV YLIIVISFAI ISCNKNSNTE EILQKENPKK ENPKKEEPKK GDSSLLAYSK 
PFYLFTETKA YEMTKQEKDP YLKKLYYQIA ATPTAEWFEG VEAFDDTTLK RLIEGAKAQQ
KTPIITLYGI PYRDCGSYST GGHKTATSYK AWIDRTSAII GKTPIIVIVE PDAHNFCLKK
GWKYNDAKYK ERAELLTYVG KTFADNNPNA LLYLHIGGTE LKQEEAAQAV IDGGIRYMRG
FVTNVADHRG TPRAEKWSEE FVQTLQKKNL GTKYYVIDTS RNGIDSPKQT NKAYYYSCNN
FNAALGVRPT TKTSAPHADA YLWIKHPGLS DGTCANGDPK AGSWYPAVAK SLVQKAIEKG
IIEEWKVPNN F