Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0518 |
Symbol | |
ID | 8366930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 655817 |
End bp | 656932 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644982942 |
Product | Cellulase |
Protein accession | YP_003140639 |
Protein GI | 256819360 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA ATATTATTTT AACGTATGTT TATCTCATCA TTGTGATATC TTTCGCAATC ATCTCTTGTA ACAAAAACAG TAACACTGAA GAGATTCTAC AAAAAGAAAA TCCTAAAAAA GAGAACCCTA AAAAGGAAGA ACCTAAAAAA GGAGACAGTT CTTTATTAGC TTATTCCAAG CCTTTCTATC TCTTTACTGA AACTAAGGCT TATGAAATGA CTAAGCAAGA AAAAGACCCT TACTTAAAGA AACTCTATTA CCAAATAGCC GCTACTCCCA CAGCTGAATG GTTCGAAGGC GTAGAAGCCT TCGACGATAC TACCTTAAAA CGCCTCATCG AAGGCGCAAA GGCACAACAA AAAACACCTA TCATCACACT CTACGGCATT CCTTATAGAG ATTGTGGTTC GTATTCAACT GGAGGTCATA AAACGGCTAC TTCTTATAAG GCGTGGATAG ATCGCACCAG TGCTATTATT GGCAAAACCC CTATAATAGT GATTGTAGAA CCCGATGCCC ATAACTTTTG TTTAAAGAAA GGCTGGAAAT ACAACGATGC AAAATACAAA GAACGCGCTG AACTCCTCAC TTATGTAGGA AAGACTTTTG CTGATAACAA CCCGAATGCG TTGTTGTATT TGCATATTGG CGGAACAGAA CTCAAACAAG AAGAAGCTGC CCAAGCGGTA ATAGATGGCG GTATCCGGTA TATGCGTGGC TTTGTTACCA ACGTCGCCGA CCACAGAGGG ACTCCTCGGG CTGAAAAGTG GAGCGAAGAG TTCGTACAAA CGCTCCAAAA GAAAAACTTA GGCACAAAAT ACTACGTGAT AGACACCTCC CGCAATGGTA TCGATAGCCC TAAACAAACC AATAAAGCTT ATTATTACAG TTGTAACAAT TTCAATGCCG CTTTAGGAGT ACGCCCTACC ACCAAAACCT CTGCTCCTCA CGCCGACGCT TATTTGTGGA TTAAACATCC TGGCTTATCC GATGGTACTT GTGCCAATGG CGATCCTAAG GCAGGCTCTT GGTATCCCGC AGTAGCAAAA TCATTAGTGC AAAAAGCTAT TGAAAAAGGA ATTATAGAAG AGTGGAAAGT CCCTAACAAC TTTTAA
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Protein sequence | MKKNIILTYV YLIIVISFAI ISCNKNSNTE EILQKENPKK ENPKKEEPKK GDSSLLAYSK PFYLFTETKA YEMTKQEKDP YLKKLYYQIA ATPTAEWFEG VEAFDDTTLK RLIEGAKAQQ KTPIITLYGI PYRDCGSYST GGHKTATSYK AWIDRTSAII GKTPIIVIVE PDAHNFCLKK GWKYNDAKYK ERAELLTYVG KTFADNNPNA LLYLHIGGTE LKQEEAAQAV IDGGIRYMRG FVTNVADHRG TPRAEKWSEE FVQTLQKKNL GTKYYVIDTS RNGIDSPKQT NKAYYYSCNN FNAALGVRPT TKTSAPHADA YLWIKHPGLS DGTCANGDPK AGSWYPAVAK SLVQKAIEKG IIEEWKVPNN F
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