Gene Coch_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0509 
Symbol 
ID8366921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp644029 
End bp645672 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content44% 
IMG OID644982934 
Producthypothetical protein 
Protein accessionYP_003140631 
Protein GI256819352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATA GATTCCCCAT ACTGCTCACT ATATTCATCG CCTTACTGCT GTGGCAGTGC 
GCCCGTCGTG GTTCGCCCAC AGGAGGTCCC AAAGATACTA CTGCACCTGT CCTTTTGCAG
TCGGTGCCAA GGTCGGGAGC AATGAAGTTC TACGGCAAGA AAATACGTTT GCAGTTCGAT
GAGTTTGTGG TTACCAAAGA CGTGCGCAAA CAGCTTATCA TCTCCCCCCC GATGAAAACC
TTCCCTACTA TTTCGCCTAC TTCAGCTTCG AAATGGTTGG AAATAAACAT TATCGATACC
CTAAAACCCA ATACTACCTA CGTGCTGAAC TTCGGCAATA GCATTCAGGA TTACAACGAA
GGCAATCCTT TGTCCGATTT TAAATACGTG TTTTCCACTG GCGATGCGCT CGACTCGCTT
TGGTATGAAG GTGATATTGC CGATGCCATT GCCCCTAAAC CCGATAACTT TGTAACGGTG
ATGCTCTACC CTTATAATGA GCAGTATAAC GATTCGCTCG TGTACAAAAC GCAACCTACT
TACGTTACTA ATACGCTCGA TAGTCTCGAT AGCTTTGTGC TCGAATACCT CAAAGAAGGC
AAATACAAGC TCATTGCGCT GAAAGAGAAG AGTGCCAACT ATCTGTTCAA TCCCAAAGAC
GACAAAATTG CCTTTATGGA AGAACCTATC ACCGTCGCCG ATTTGAAGGG GAATCCACAG
GGTTTCTACC CCAAATTGCG CTTGTTCAAA GAAGTGCCCC CTTATAAAGC ACACCGCCCT
ACACAAGTGG CGGGTAACCA TATACAGTTT GGCTTCGAAG GTAAAACCGA TAGTGTGAGC
ATCAAGCCGA TATCACCGGT GAGTAAAGAT TTTAAGTATA TCGTCTCCAA AGACCCCAAG
AAAGATACGC TCAACCTGTG GTATAGCCCT AAACAGAAGG ATTCTTTGGT ATTTACAGTA
GCAAAACAGA AAAAAATTGA TACGTTTAAA GTCCGTATAA AGGAAATGAA GAACGACAGT
TTGCAGATAG AGAACCTTTT TTCGGGTGAT TTGCCGATGT ACAAAGACTT TGGTTTTAGG
AGTAATATCC CCATAGTAAA GACCGATAGC ACTAAGCTAA AAGTGTTTGC AGGCAAAGAT
TCTACGGCGA TAGCTGTTCC GTTTAAAACG CAATTAGCCC CTAATCGCTT AGAATACTAT
GTGCTATTCG ATAAAAAGAA TGACGAGACC TACCGCATAG AAGCACTCCC TAATGCGCTC
ACCGACTTTT TTGGACATAC GAACGATACC CTAAAAGTAA ACCTACATAC CAAAAAACTC
GAAGAAGTAG CCATCTTTAA GTTGCACCTC AACACCGATG AGAAGACCTT GCAATACCCT
GTTATTTTGC AACTCACCAA TGAAAAAGCT ACCGAGGTAG TGAGAGAGCT TTATGTTGAA
AAACCACAAG AGCAATACCT GTTCGAGAAC GTAAACCCCA GTAAGTTCCG CTTACGCCTG
ATAGAGGACA AGAATGCTAA TCGAGAGTGG GACACAGGTA GTTTCCTTGA ACAACGCCAG
CCCGAGCGAG TCTGGTATTT CCCACAACTC ATAGAACTTC GCGCCAACTG GGAAGTAGAA
GAAACTTGGA GTATTAACGA ATGA
 
Protein sequence
MKHRFPILLT IFIALLLWQC ARRGSPTGGP KDTTAPVLLQ SVPRSGAMKF YGKKIRLQFD 
EFVVTKDVRK QLIISPPMKT FPTISPTSAS KWLEINIIDT LKPNTTYVLN FGNSIQDYNE
GNPLSDFKYV FSTGDALDSL WYEGDIADAI APKPDNFVTV MLYPYNEQYN DSLVYKTQPT
YVTNTLDSLD SFVLEYLKEG KYKLIALKEK SANYLFNPKD DKIAFMEEPI TVADLKGNPQ
GFYPKLRLFK EVPPYKAHRP TQVAGNHIQF GFEGKTDSVS IKPISPVSKD FKYIVSKDPK
KDTLNLWYSP KQKDSLVFTV AKQKKIDTFK VRIKEMKNDS LQIENLFSGD LPMYKDFGFR
SNIPIVKTDS TKLKVFAGKD STAIAVPFKT QLAPNRLEYY VLFDKKNDET YRIEALPNAL
TDFFGHTNDT LKVNLHTKKL EEVAIFKLHL NTDEKTLQYP VILQLTNEKA TEVVRELYVE
KPQEQYLFEN VNPSKFRLRL IEDKNANREW DTGSFLEQRQ PERVWYFPQL IELRANWEVE
ETWSINE