| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0485 |
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| Symbol | |
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| ID | 8366896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 622390 |
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| End bp | 623847 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644982911 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003140609 |
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| Protein GI | 256819330 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.165691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAA ATAAAAAATC CTTTGGTCAA ACACTCAAAA CTTTCTCACC CAACTTCTGG
GTAGCAAGTT TCCTCCAACT GATGGAACGT TGGGGCTTCT ACGGTATCTT TACCCTTCTC
CCCTTGTATT TAGTAGCTTC AACTGACCAA GGCGGATTAG GTCTTTCGCA TACCGAAAAA
GGAAGTATTA TAGGTAACGT AACCGCTATA CAGTACTTTT TGCCACTCGT CTTTGGCGTG
ATAGCCGACC GTATAGGCTA CAAACTCTCT TTAGTCATTT CTTGTACTAT AATGGCGATA
GGCTATTACC TAATGGGTGA AGTAAACACC TATTGGTCGA TGTATATGAT GTTCCTCTTT
GCCGCCGTTG GAGGGGGCTT CTTCAAACCC GTTATCAACG GTACCGTTGC CCGCAATACC
GATGAAAGCA CCAGTACAAT GGGCTTCGGT ATCTTCTATA TGATGGTAAA CGTCGGAGGC
TTCTTAGGTC CTGCAATGTC GTCTTACCTA CGCACTACCC TCGGTTGGCG CATTATCTTC
CTGCAAGCTG CGGTGGTAAT GGTTATCAAC CTGCTGGTAG TTTTATTCTT TTTCAAAGAA
CCTAAAATGG CACAACGCGA CAGCAAACCT ATCCTCACCG AAATCAAAGA ATCCATAATG
CACATTATAG AGGCACTCAA AGACCGTCGC CTTACCATAC TGCTCATACT GATGGTCGGC
TTTTGGACGA TGTTCAACCA GCTGTTCTAC ACCCTGCCTA ATTTTATCGA AGATTGGGTA
GATTCCTCCA AAGTAAGTGC GTGGATTAAC CATCATTTGC CTTTCTTAGG CACTATTCTC
ACCGAAAAAG GACAAGTAAA AGCCGAATGG TTTATCAATA TCGATTCGTT TATGATTATC
TTCTTTCAGG TAGTTGTATC CTATTTCGTA ACCAAAATGA CTCACGTAAG CGCAATGATT
CGCGGTACGA TTATCGGAAC CATAGGGGTA ACGCTCACTT TTATGTTTAA TAATGTGTGG
TTTACCATTA TAGGCACTAT GATTTTCTCC ATAGGCGAAA TGGCTGCTAG CCCCACGCTT
TCAGCTTTTA TCGCTCAAAT CACCCCTAAG GGGAAGGAAG CCCTCTATCA AGGCACTTAT
TTCTTGCCTG TGGCGGTAGG TAATTATATT GCAGGACTTA TTTCTGGTGA TTTATACGAA
AAATGGTCTG ATAAATATAC TTTACTAAAA ACCGAACTCA CAAATAAAGC CATTGCAATG
CCCGAAAATC TCACTAAAAA GGAATATTTC GATTTGGCAA GTCAGAAGTT AGGTCTCAGT
CAGTCTCAAA TCACCGATTT GCTTTGGAAT ACTTATAACC CCAACAAAAT GTGGTATCTT
ATTTGTGGAA TAGGTGTCTT TGCTGCCCTA TCACTATATG CCTATAACAA AATAATGGTA
AGAAAAGAAT CAATTTAA
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| Protein sequence | MSENKKSFGQ TLKTFSPNFW VASFLQLMER WGFYGIFTLL PLYLVASTDQ GGLGLSHTEK
GSIIGNVTAI QYFLPLVFGV IADRIGYKLS LVISCTIMAI GYYLMGEVNT YWSMYMMFLF
AAVGGGFFKP VINGTVARNT DESTSTMGFG IFYMMVNVGG FLGPAMSSYL RTTLGWRIIF
LQAAVVMVIN LLVVLFFFKE PKMAQRDSKP ILTEIKESIM HIIEALKDRR LTILLILMVG
FWTMFNQLFY TLPNFIEDWV DSSKVSAWIN HHLPFLGTIL TEKGQVKAEW FINIDSFMII
FFQVVVSYFV TKMTHVSAMI RGTIIGTIGV TLTFMFNNVW FTIIGTMIFS IGEMAASPTL
SAFIAQITPK GKEALYQGTY FLPVAVGNYI AGLISGDLYE KWSDKYTLLK TELTNKAIAM
PENLTKKEYF DLASQKLGLS QSQITDLLWN TYNPNKMWYL ICGIGVFAAL SLYAYNKIMV
RKESI
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