| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0473 |
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| Symbol | |
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| ID | 8366879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 603499 |
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| End bp | 605973 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644982894 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_003140597 |
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| Protein GI | 256819318 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAGA TTAAATTACT TATTATATAC TTACTTTTAG TTATTTCTCA GGCAGTAGCA
CAGGTGACTT CTCCTAATGC TACCTATAAC AATGTGGATA TCACTACTGT GAATGTGGAT
AACTTGAGTG ATGCACAAAT TAAAAATTAT TGGGATCGCG CTCAAGCACA AGGTTATTCA
TTAGACCAAT TCATTGCTTT GGCTCGTAGT CGCGGTATGC AAGAAACGCA AGTAATGAAG
CTTAGGCAGC GCATTATGCA ACTTGGCACT TCTTCTGATA TTAAAAACAA ACTTAAAGAA
AACACAAAAA CAGGTAGGCG TCCGGCTGAA GGTGATGAAA TTTTTGGTTA TACCGGTAAA
GAAAACAAAG ATTCTATCAC TACTAAACAG AAAAAGGATT CTATATTTGG AATGAGTTTC
TTCAAGAATC CTAAAATATC TTTTACTCCT AACCTCAATA TGGCAACTCC CGACAACTAT
CAAGTAGGTC CTGGTGATGA ACTACTCGTG GAAGTTTGGG GGGCGACAGA AGGTTCTTTT
AAGCAAAAAG TAGACGCTGA GGGGAATATA TTCCTAAATG GTATCGGGCG CATTCACGTG
GGAGGACTTT CGTTCAGTGA AGTGAAGGCT AAGATTAATT CACAGCTCAA GCGCATTTAT
TCTGGTATTT CGGCTCCTGA GGGTAGTTAT GCGAAAATTT ATACAGGGGT AACTATCAGT
CAGGTGCGTA CAGTAAAAGT GAATATCATA GGCGAAGTGG CAGTTCCTGG GACTTATTCG
CTTAGTTCGC TTTCAACGGT GCTCAACGCA TTATATGCTT GTGGAGGTCC TTCGGAAAGT
GGTTCGTTTA GGGAAATAAA CATCTTTCGA GGAGGTAAAA AAGTTGCTAC TTTTGACGTG
TACAATTTTC TAATAAATGG TTCAGAAAAA GGCAATATAG GTCTTAAAGA CCAAGATGTG
ATTATTGTAC CCCCATATAA AAACCGTGTA TGGGTGGACG GGAAAGTAAA ACGACGTGGT
TTTTATGAGA CTTTAGACAA TGAGACGCTA GCAAACCTCA TCACCTTCTT TGGAGGTTTT
ACCTCTGATG CTTTTACCAA TACTTTGGTG TTGGAGCGCA TTAAAGATGC TAAACGCGAA
GTAAAAGAGA TTCTTTTTGC TGATATTTCA AAAGTAAAAA TGCAAAATGG TGACCGCCTA
AATGTACACG CTATTACTGA TGAATACCAT AATAGGCTCA GTATAGGCGG AGCTGTATAT
CAGCCTGGGG TATACGAGTT TAAAGAGGGA ATGACGGCTT ACGACTTACT CAACAGAGCT
AACGGTGTGA GAAAAGATGC TTCCTTGAAT AGAGGTCTTA TCTTCCGCAC TGAAAACCGC
GTGGATTACC AAACACTTAG TTTTTCGGTA AAAGACCTCA TAGAAAAGAA AAATGATATT
CCGTTAAAAG ACAATGATAG TATTCATATT TTTTACAGAG ATTCTCTTCA GTACAAACGC
TTTGTAAAGG TAGAAGGAGC TGTAAATAAG CCAAAAGAAT TACCTTTTAT GGAGAATATG
ACAGTGGAAG ATGTGATATC ATTGGCAGGT GGTTTGGCTA ATGGAGCAGA CCCTTCGATG
ATTGAGATAT TTAGAGAAAC TAACGATGGT AATTTTCAGA AACTAAGTCA ATCCTTTAAA
GTATCGTCTA ATCATCAGTT AGAGCCCCAA GGAGAACGAC TTATCTTGCA ACCTAACGAT
GTTGTATCGG TACGTTATAT CAAAGGATTT ACTCCTATGC AAACTGTAAC GGTAATGGGA
GAAGTGCTCT ACCCAGGTGT TTATAGTATT CAATCTAAAG ACGAACGTGT TTCGGATTTA
TTAGAGCGTG TGGGCGGTTT TACTCCCTTT GCCTATAAAG AAGGACTTAC TCTTGTGAGA
AAAAAGACAG ATGAGGGTGA TATTCAGCAA GAAGATTTCT TAAAAGAACT CATTGAGATT
GAGAATGACA CGAGCAGTAG CACTTCGAAT AAAACACTGA GAAGAGTAGC TAAAAAAAGC
AATGAGTATC GCATAGGGCT TGATGTAAAA AAGATATTAA ACCGAAAACA CAGCAAATAT
GACCTTTTGC TCAATGACGG AGATATGTTA TTAGTCCCTT CAGAAAAACA AACTGTGGAA
ATTAGAGGAG AAGTATTAGC GCCTTCATTA GTGCGTTATG AAAAAGGAGC TTCTATGCAT
CAGTATGTCA GTAGTGCAGG AGGCTTTGCC AGCAGAGCGA AGAGGAGTGC TATTTATGTG
ATGTATGCCA ATGGAGATAT AAAGGCAACA CGTACCTCTC TATTCTTTAA AAACTACCCC
AAAATAGAGC CTGGGGCCAT TATTATAGTA CCTTCAAAAC CCGAAAAACA ACGCCTTACA
ACGGGAGAAA CGGTGGGTAT CATTTCGGCT ATTACTACTA TGGGAGTGTT AATTTACAGT
GCTTTTAAAA AATAA
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| Protein sequence | MLKIKLLIIY LLLVISQAVA QVTSPNATYN NVDITTVNVD NLSDAQIKNY WDRAQAQGYS
LDQFIALARS RGMQETQVMK LRQRIMQLGT SSDIKNKLKE NTKTGRRPAE GDEIFGYTGK
ENKDSITTKQ KKDSIFGMSF FKNPKISFTP NLNMATPDNY QVGPGDELLV EVWGATEGSF
KQKVDAEGNI FLNGIGRIHV GGLSFSEVKA KINSQLKRIY SGISAPEGSY AKIYTGVTIS
QVRTVKVNII GEVAVPGTYS LSSLSTVLNA LYACGGPSES GSFREINIFR GGKKVATFDV
YNFLINGSEK GNIGLKDQDV IIVPPYKNRV WVDGKVKRRG FYETLDNETL ANLITFFGGF
TSDAFTNTLV LERIKDAKRE VKEILFADIS KVKMQNGDRL NVHAITDEYH NRLSIGGAVY
QPGVYEFKEG MTAYDLLNRA NGVRKDASLN RGLIFRTENR VDYQTLSFSV KDLIEKKNDI
PLKDNDSIHI FYRDSLQYKR FVKVEGAVNK PKELPFMENM TVEDVISLAG GLANGADPSM
IEIFRETNDG NFQKLSQSFK VSSNHQLEPQ GERLILQPND VVSVRYIKGF TPMQTVTVMG
EVLYPGVYSI QSKDERVSDL LERVGGFTPF AYKEGLTLVR KKTDEGDIQQ EDFLKELIEI
ENDTSSSTSN KTLRRVAKKS NEYRIGLDVK KILNRKHSKY DLLLNDGDML LVPSEKQTVE
IRGEVLAPSL VRYEKGASMH QYVSSAGGFA SRAKRSAIYV MYANGDIKAT RTSLFFKNYP
KIEPGAIIIV PSKPEKQRLT TGETVGIISA ITTMGVLIYS AFKK
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