| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0463 |
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| Symbol | |
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| ID | 8366869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 591657 |
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| End bp | 592901 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644982884 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003140587 |
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| Protein GI | 256819308 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA AAACCGTTCT CATTATTTTA GCCGTTATAT TGCTAATTAT CATTTTGATT
ATTGGTAAAA AAGCTGGTTG GTTTGGCGAA GAAAATTCTG CCATAAACGT CGAAACTCAA
AAAGTAATTC CTACAACACT CATCCAAAAA GTGTCGGCTA CAGGAAAAAT ACAACCCGAA
TTAGAAATCA AGCTATCGTC GGAAGTATCA GGCGAAATTA TAGAACTCCC TGTAAAAGAA
GGGCAAATGG TAAAAAAAGG CGACCTTTTG GTGCGCATCA ACCCCGATAT TTACCAATCG
GTAGTAAAGC GTAGTGCTGC AAGTTTAGAA ACCGTACGCG CCAGCTTACA ACAGTCCAGC
GCTACCCTCA AAGAAGCCGA AGAGAGCTAT AAGCGCAACA AAGTGTTGTT CGATAAGGGC
GTAATCTCAA AATCCGATTG GGATAAAGCT GTTTCAGCCT ACGAGGTAGC CAAAGCCTCT
CGCGAGTCAG CTCGTTTTAA TGTACAGAGT GCAATGGCAA GTGTTTCCGA AGCTCAAGAC
AACCTCAAAA AAACGATTAT TTATTCACCT ACCGATGGCA CTATTTCTAA GCTCAGCGTA
GAGTTGGGCG AGCGCGTAGT AGGTACGATG CAAATGACGG GTACCGAGAT TATGCGTGTG
GCAAATCTTC ATAATATGGA AGTAGAAGTA GATGTAAATG AGAACGATAT CGTAAAAATA
AGTGTAGGCG ACTCGGTGAA TGTCGAAGTA GATGCTTACC TAAAACGCGT GTTCAAAGGT
ACCGTTACCA ATATCGCCAA TACCGCCAAT GCCACCACCA GCGCAGACCA AGTAACGAAC
TTCAAAGTCA AGATACACAT CGAAGAAGCA TCGTATAAAG ACCTCTCAGA AAACAAACCG
GTTGGCTATT CGCCCTTCCG TCCAGGTATG ACCGCAACGG TAGATATTAT CACCCAAACC
AAAAAAGACG CAGTTGCAGT ACCTATCAGT GCCATTATTG TAAAAAAGAA ATCTGAAATC
GACCCTAAAA CCCCTAAGGA AGAAGCCGAC AAAAAGCAGG AAGCGGTGTT TGTGCTCAAA
GACGGTAAAG CCGAACTCCG TGCGGTAACT ACCGGTATTC AAGATAATGT GAATATCGAA
ATCCTTTCAG GTGTAGCCAA AGACGAGACT ATTATCACCG GTCCTTACAG CGCTGTAAGT
AAAACTTTGA AAAATGGCGA TGCCGTTCAA ACAACTAACA AATAA
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| Protein sequence | MKRKTVLIIL AVILLIIILI IGKKAGWFGE ENSAINVETQ KVIPTTLIQK VSATGKIQPE
LEIKLSSEVS GEIIELPVKE GQMVKKGDLL VRINPDIYQS VVKRSAASLE TVRASLQQSS
ATLKEAEESY KRNKVLFDKG VISKSDWDKA VSAYEVAKAS RESARFNVQS AMASVSEAQD
NLKKTIIYSP TDGTISKLSV ELGERVVGTM QMTGTEIMRV ANLHNMEVEV DVNENDIVKI
SVGDSVNVEV DAYLKRVFKG TVTNIANTAN ATTSADQVTN FKVKIHIEEA SYKDLSENKP
VGYSPFRPGM TATVDIITQT KKDAVAVPIS AIIVKKKSEI DPKTPKEEAD KKQEAVFVLK
DGKAELRAVT TGIQDNVNIE ILSGVAKDET IITGPYSAVS KTLKNGDAVQ TTNK
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