Gene Coch_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0454 
Symbol 
ID8366860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp582610 
End bp583170 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content40% 
IMG OID644982875 
ProductGrpE protein 
Protein accessionYP_003140578 
Protein GI256819299 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCG AAGATATTAA AAACGATGAC TTAGAACTTG AACAAGAGGC AACTGATAAC 
ACTCCTTCGG AAGAAGTTGA AGAACCTACT TCTGTTGAAG AGACCGAAGA GCCCGTTAAA
GAAACTTCAG AAGACCTTCT TGCAAAAGAG AAGGACAAGT TTTTGCGTTT GTTTGCTGAG
TTCGAAAACT ATAAGAAGCG CACTGCGAAG GAACGTGCAG AGCTCTTTAA AACTGCTGGA
CAAGACATTT TGTCAGCCTT GTTGCCTATA ATAGACGATT TTGACCGTGC TTTGGTAGAA
TTGGCTAAAT CGGCTGATGA ACATACTCTT AAAGGGGTGG AACTCATCTA TAATAAATTA
ATAAACACTC TCAAATCAAA AGGATTAGAG AAAATAGAAG TTGCCCCTAA CGACACTTTT
GACAGTGAAC ATCACGATGC AGTTACCCAA ATTCCTGCTC CTACTCCTGA AGACAAAGGC
AAAATTGTAG ATGTTGTGCA AACAGGCTAC AAATTAGGCG ATAAAGTAAT ACGTTTCCCC
AAAGTAGTGG TAGCGCAATA A
 
Protein sequence
MITEDIKNDD LELEQEATDN TPSEEVEEPT SVEETEEPVK ETSEDLLAKE KDKFLRLFAE 
FENYKKRTAK ERAELFKTAG QDILSALLPI IDDFDRALVE LAKSADEHTL KGVELIYNKL
INTLKSKGLE KIEVAPNDTF DSEHHDAVTQ IPAPTPEDKG KIVDVVQTGY KLGDKVIRFP
KVVVAQ