Gene Coch_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0412 
Symbol 
ID8366818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp522500 
End bp523090 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content37% 
IMG OID644982833 
Productprotein of unknown function UPF0157 
Protein accessionYP_003140536 
Protein GI256819257 
COG category[S] Function unknown 
COG ID[COG2320] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAG AAGAAAATCC TTTGTTAAAA ATGTCGTTGC AGGAATTGTG GCAACTGTTT 
CCTATCAATC TTACACAGCA CAACCCATTG TGGAAAGAAT GGTATGAGGA AGAACGCAGT 
TTCCTTTTAA AACAATTACC CTCTAACGAA GTACGGCTAA GCCATATAGG TAGTACTGCT 
GTGGAAGGGA TACAAGCCAA ACCTATTGTA GATATGTTAT TAGAAGTGAA AAAGGACAGT 
TCATTTCAGA AGCTAAAAGA ACTCATATTA CAATCAGGTT ATCTATGTAT GAATGAAACA 
AACGATAGGA TTTCTTTTAA TAAAGGCTAT ACTATTAATG GGTTTGCAGA ACGTGTATTT 
CATCTGCACT TGCGTTATGA AGGCGATAAT GACGAACTCT ATTTTCGCGA TGAACTGCAA 
GCACACCCAT CGGTAGCCAA AGACTATGAA ACGCTTAAAT TATCGCTTTG GAAACCTTTT 
GAGCACGACC GAGATGCTTA TACCGCTCAC AAAACAGAGT TTGTGAAACA ATATACACTG 
ATAGCAAAAG AAGAATTTAA AGGACGATAT GAAAATAACA GACCATATTA A
 
Protein sequence
MNQEENPLLK MSLQELWQLF PINLTQHNPL WKEWYEEERS FLLKQLPSNE VRLSHIGSTA 
VEGIQAKPIV DMLLEVKKDS SFQKLKELIL QSGYLCMNET NDRISFNKGY TINGFAERVF 
HLHLRYEGDN DELYFRDELQ AHPSVAKDYE TLKLSLWKPF EHDRDAYTAH KTEFVKQYTL 
IAKEEFKGRY ENNRPY