Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0411 |
Symbol | |
ID | 8366817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 520074 |
End bp | 522488 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644982832 |
Product | aspartate kinase |
Protein accession | YP_003140535 |
Protein GI | 256819256 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.204569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAT TAAAATTTGG TGGAAAATCA CTTGCCAATG ACGGCATTGA AAAGGTACTC AGTATCATTG CTGGGCTTGC TAAAACTGAA CCTATATCAG TAGTAGTTTC AGCACGAGGC AACACTACCG ATGAATTAGA GGCTTTGCTC GAAAAAGCGA GTAAAGGTGA AGATTATACT GCCGACTTTC AACAACTGAA AGACGAACAG CAGTATAACG ATAGTGTGTC GTTTGAGTCC GAATTTCAGT TGCTCGAAAA ACTCCTTGAA GGCGTTTCGC TACTGAAAGA CTACAGCCCT AAGACCAAAG ATTTGGTATT GGCACAAGGC GAACTGATGT CTGCTAAGCT TGTGGCAACA CTACTTCAGC AAAAAGGCTT GGAAAGTACT TTTGTGGATA GTCGTGAAAT CTTCAAAACT GATGCTGTGG TAGGCAATGC GCAGATTATC AATTCAATAT CCAAAAAACT CACTCGCGAC CGCTTTGCAA CCATTTCACC TAATTGTGTG GTAGTGGTTA CAGGCTTTAT CGCTTCCACC GAAAAAGGCG ACACCACTAC CTTAGGGCGC AATGGCAGTA ACTATTCGGC AGCGCTTCTG GCTAACTACC TCAACGCTTC CGAACTGCAA AACTATACTC ACGTCGACGG TATCTTCACT GCCAATCCTG AGTTAGTACC CGAAGCCAAA ATTATACGTC ATCTTTCTTA TGAAGAAGCC AATGAGTTGG CTAACTTCGG GGCTTCTATA CTTCACGCTA AAACCATTAT CCCACTCATT GAAAAAGGCA TTCCGTTGCG TATTAAAAAC ACTTTCAACA GTGAGGACGC CGGCACACTC ATTCACCAAG AAAGCGTGCA AGAGGGCATC AAATCGATTT CGGTAATTAA AGACAATGCC CTTATCGTGA TGGAAGGTCG CGGACTCTTG GGCAAAGTGG GCGTAGATGC TCGTATTTTT AAAGCACTCG CACAAAAAGG TATCAGTGTG AGTATCATCT CACAAGGTTC ATCGGAGCGC GGGGTAGGCT TGGTAGTAGC TTCAAAAGAT GCTAAACTTG CCAAAGCTGC TATAGACGAG GAATTCTCAC ACGACTTCTA CACCAATGAT GTGAGCAGTG TGAGCATCGT AGAAGATGTA GCTGTAATTT CTATCGTAGG ACAACCGCTT GCTACTTTCC ACCACCCTTA TAACGCTTTG ATACGCAACC AAATCGTTCC TTTGCTTATC AACAATGCCG TAACGGGCAA AAACGTGAGT TTGGTACTCA AAACCGAAAA ACTCCACAAG GCTTTGAACG TAATTCACGG TGAAATCTTT GGGGTTTCAC GCCGTATCAA CTTGGTAATC TTTGGTAAAG GTACCGTAGG GGCTACCCTC ATCGACCAAG TGATTGCCGC ACACGACAAT ATACTTCACC GCAAGAACAT CAGTTTGCGT ATCGTTGCTA TCGCCAATTC ACAACAAGTG CTCACCAATG CAAAAGGAAT TGGCAGTCAT TGGCGCTCTG CCTTCGATAA AGAAGCTGTG CCTTATAGTT TCGACACTCT GCAAGCCTTT GTCGATAAAC ATCACTTAGA GAACCTTATC GCCGTAGATG TAACCGCCAG CAAAACCTTT GTAGACAACT ATATCCCACT TATCAAGAGC GGTTACGACT TGGTTTCAGC TAATAAAATA GCGAATACTA TTTCGTTTGA CTTTTACCAA GAGCTACGTA AAACTCTCAA ACAACACCAA AAAACTTATC TCTACGAAAC CAATGTAGGG GCAGGCTTAC CCTTGATAGA CACTATTCGT CTCTTGCACC ATTCGGGTGA GAATATCACT CGTATCAAGG GGATATTCTC AGGAACGCTC AGCTATTTGT TCAATACTTT TTCAGCAGAA AACAAGCCGT TTAGCGAGGT GCTCCAACAC GCTATCAACA GTGGTTATAC CGAACCCGAC CCTCGTGAAG ACCTTTGTGG TAATGATGTA GGTCGCAAAC TGCTCATTTT AGCCCGCGAA CTCGATTTAG GTAATGAGTT CACCGATGTG AAGATACAAA ACCTTATCCC CGAACATTTA AGAGAAGGCT CTGTGCAAGA CTTTTTGCAA CGTTTAGACG AGTTTAATGC GCCTTATCAG CAAATCAAAG AAGCGCAAGC CCCCGACCAC GTACTGCGTT ATGTAGGTGA CCTTCACGGC GACTTAGCTT CTACCGAAAC GGTTCAGTTA GACGTATCGC TCGTATCGGT TCCGCGCAAC AGTGCCCTCG GTCAAGTAAA AGGAGCTGAC TCTATTTTTG AGATTTACAC CGAATCTTAC GGCGATAACC CTATCGTGAT ACAAGGTGCA GGAGCAGGCG CTTCGGTAAC CGCACGAGGG GTATTTGGCG ACATTTTAAG ATTAGCAGAG AAAAGTAGGT TTTAG
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Protein sequence | MKILKFGGKS LANDGIEKVL SIIAGLAKTE PISVVVSARG NTTDELEALL EKASKGEDYT ADFQQLKDEQ QYNDSVSFES EFQLLEKLLE GVSLLKDYSP KTKDLVLAQG ELMSAKLVAT LLQQKGLEST FVDSREIFKT DAVVGNAQII NSISKKLTRD RFATISPNCV VVVTGFIAST EKGDTTTLGR NGSNYSAALL ANYLNASELQ NYTHVDGIFT ANPELVPEAK IIRHLSYEEA NELANFGASI LHAKTIIPLI EKGIPLRIKN TFNSEDAGTL IHQESVQEGI KSISVIKDNA LIVMEGRGLL GKVGVDARIF KALAQKGISV SIISQGSSER GVGLVVASKD AKLAKAAIDE EFSHDFYTND VSSVSIVEDV AVISIVGQPL ATFHHPYNAL IRNQIVPLLI NNAVTGKNVS LVLKTEKLHK ALNVIHGEIF GVSRRINLVI FGKGTVGATL IDQVIAAHDN ILHRKNISLR IVAIANSQQV LTNAKGIGSH WRSAFDKEAV PYSFDTLQAF VDKHHLENLI AVDVTASKTF VDNYIPLIKS GYDLVSANKI ANTISFDFYQ ELRKTLKQHQ KTYLYETNVG AGLPLIDTIR LLHHSGENIT RIKGIFSGTL SYLFNTFSAE NKPFSEVLQH AINSGYTEPD PREDLCGNDV GRKLLILARE LDLGNEFTDV KIQNLIPEHL REGSVQDFLQ RLDEFNAPYQ QIKEAQAPDH VLRYVGDLHG DLASTETVQL DVSLVSVPRN SALGQVKGAD SIFEIYTESY GDNPIVIQGA GAGASVTARG VFGDILRLAE KSRF
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