Gene Coch_0411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0411 
Symbol 
ID8366817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp520074 
End bp522488 
Gene Length2415 bp 
Protein Length804 aa 
Translation table11 
GC content44% 
IMG OID644982832 
Productaspartate kinase 
Protein accessionYP_003140535 
Protein GI256819256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.204569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAT TAAAATTTGG TGGAAAATCA CTTGCCAATG ACGGCATTGA AAAGGTACTC 
AGTATCATTG CTGGGCTTGC TAAAACTGAA CCTATATCAG TAGTAGTTTC AGCACGAGGC
AACACTACCG ATGAATTAGA GGCTTTGCTC GAAAAAGCGA GTAAAGGTGA AGATTATACT
GCCGACTTTC AACAACTGAA AGACGAACAG CAGTATAACG ATAGTGTGTC GTTTGAGTCC
GAATTTCAGT TGCTCGAAAA ACTCCTTGAA GGCGTTTCGC TACTGAAAGA CTACAGCCCT
AAGACCAAAG ATTTGGTATT GGCACAAGGC GAACTGATGT CTGCTAAGCT TGTGGCAACA
CTACTTCAGC AAAAAGGCTT GGAAAGTACT TTTGTGGATA GTCGTGAAAT CTTCAAAACT
GATGCTGTGG TAGGCAATGC GCAGATTATC AATTCAATAT CCAAAAAACT CACTCGCGAC
CGCTTTGCAA CCATTTCACC TAATTGTGTG GTAGTGGTTA CAGGCTTTAT CGCTTCCACC
GAAAAAGGCG ACACCACTAC CTTAGGGCGC AATGGCAGTA ACTATTCGGC AGCGCTTCTG
GCTAACTACC TCAACGCTTC CGAACTGCAA AACTATACTC ACGTCGACGG TATCTTCACT
GCCAATCCTG AGTTAGTACC CGAAGCCAAA ATTATACGTC ATCTTTCTTA TGAAGAAGCC
AATGAGTTGG CTAACTTCGG GGCTTCTATA CTTCACGCTA AAACCATTAT CCCACTCATT
GAAAAAGGCA TTCCGTTGCG TATTAAAAAC ACTTTCAACA GTGAGGACGC CGGCACACTC
ATTCACCAAG AAAGCGTGCA AGAGGGCATC AAATCGATTT CGGTAATTAA AGACAATGCC
CTTATCGTGA TGGAAGGTCG CGGACTCTTG GGCAAAGTGG GCGTAGATGC TCGTATTTTT
AAAGCACTCG CACAAAAAGG TATCAGTGTG AGTATCATCT CACAAGGTTC ATCGGAGCGC
GGGGTAGGCT TGGTAGTAGC TTCAAAAGAT GCTAAACTTG CCAAAGCTGC TATAGACGAG
GAATTCTCAC ACGACTTCTA CACCAATGAT GTGAGCAGTG TGAGCATCGT AGAAGATGTA
GCTGTAATTT CTATCGTAGG ACAACCGCTT GCTACTTTCC ACCACCCTTA TAACGCTTTG
ATACGCAACC AAATCGTTCC TTTGCTTATC AACAATGCCG TAACGGGCAA AAACGTGAGT
TTGGTACTCA AAACCGAAAA ACTCCACAAG GCTTTGAACG TAATTCACGG TGAAATCTTT
GGGGTTTCAC GCCGTATCAA CTTGGTAATC TTTGGTAAAG GTACCGTAGG GGCTACCCTC
ATCGACCAAG TGATTGCCGC ACACGACAAT ATACTTCACC GCAAGAACAT CAGTTTGCGT
ATCGTTGCTA TCGCCAATTC ACAACAAGTG CTCACCAATG CAAAAGGAAT TGGCAGTCAT
TGGCGCTCTG CCTTCGATAA AGAAGCTGTG CCTTATAGTT TCGACACTCT GCAAGCCTTT
GTCGATAAAC ATCACTTAGA GAACCTTATC GCCGTAGATG TAACCGCCAG CAAAACCTTT
GTAGACAACT ATATCCCACT TATCAAGAGC GGTTACGACT TGGTTTCAGC TAATAAAATA
GCGAATACTA TTTCGTTTGA CTTTTACCAA GAGCTACGTA AAACTCTCAA ACAACACCAA
AAAACTTATC TCTACGAAAC CAATGTAGGG GCAGGCTTAC CCTTGATAGA CACTATTCGT
CTCTTGCACC ATTCGGGTGA GAATATCACT CGTATCAAGG GGATATTCTC AGGAACGCTC
AGCTATTTGT TCAATACTTT TTCAGCAGAA AACAAGCCGT TTAGCGAGGT GCTCCAACAC
GCTATCAACA GTGGTTATAC CGAACCCGAC CCTCGTGAAG ACCTTTGTGG TAATGATGTA
GGTCGCAAAC TGCTCATTTT AGCCCGCGAA CTCGATTTAG GTAATGAGTT CACCGATGTG
AAGATACAAA ACCTTATCCC CGAACATTTA AGAGAAGGCT CTGTGCAAGA CTTTTTGCAA
CGTTTAGACG AGTTTAATGC GCCTTATCAG CAAATCAAAG AAGCGCAAGC CCCCGACCAC
GTACTGCGTT ATGTAGGTGA CCTTCACGGC GACTTAGCTT CTACCGAAAC GGTTCAGTTA
GACGTATCGC TCGTATCGGT TCCGCGCAAC AGTGCCCTCG GTCAAGTAAA AGGAGCTGAC
TCTATTTTTG AGATTTACAC CGAATCTTAC GGCGATAACC CTATCGTGAT ACAAGGTGCA
GGAGCAGGCG CTTCGGTAAC CGCACGAGGG GTATTTGGCG ACATTTTAAG ATTAGCAGAG
AAAAGTAGGT TTTAG
 
Protein sequence
MKILKFGGKS LANDGIEKVL SIIAGLAKTE PISVVVSARG NTTDELEALL EKASKGEDYT 
ADFQQLKDEQ QYNDSVSFES EFQLLEKLLE GVSLLKDYSP KTKDLVLAQG ELMSAKLVAT
LLQQKGLEST FVDSREIFKT DAVVGNAQII NSISKKLTRD RFATISPNCV VVVTGFIAST
EKGDTTTLGR NGSNYSAALL ANYLNASELQ NYTHVDGIFT ANPELVPEAK IIRHLSYEEA
NELANFGASI LHAKTIIPLI EKGIPLRIKN TFNSEDAGTL IHQESVQEGI KSISVIKDNA
LIVMEGRGLL GKVGVDARIF KALAQKGISV SIISQGSSER GVGLVVASKD AKLAKAAIDE
EFSHDFYTND VSSVSIVEDV AVISIVGQPL ATFHHPYNAL IRNQIVPLLI NNAVTGKNVS
LVLKTEKLHK ALNVIHGEIF GVSRRINLVI FGKGTVGATL IDQVIAAHDN ILHRKNISLR
IVAIANSQQV LTNAKGIGSH WRSAFDKEAV PYSFDTLQAF VDKHHLENLI AVDVTASKTF
VDNYIPLIKS GYDLVSANKI ANTISFDFYQ ELRKTLKQHQ KTYLYETNVG AGLPLIDTIR
LLHHSGENIT RIKGIFSGTL SYLFNTFSAE NKPFSEVLQH AINSGYTEPD PREDLCGNDV
GRKLLILARE LDLGNEFTDV KIQNLIPEHL REGSVQDFLQ RLDEFNAPYQ QIKEAQAPDH
VLRYVGDLHG DLASTETVQL DVSLVSVPRN SALGQVKGAD SIFEIYTESY GDNPIVIQGA
GAGASVTARG VFGDILRLAE KSRF