Gene Coch_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0398 
Symbol 
ID8366804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp504854 
End bp505906 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content45% 
IMG OID644982819 
Productthiamine-monophosphate kinase 
Protein accessionYP_003140522 
Protein GI256819243 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAG ATAAAACGCC TCACCGTACC TCATTAGCCG ATTTGGGTGA ATTTGGACTC 
ATCGACCGCC TAACGAAGGG ATTTGAAATT CACAATCCTT CCACTCTTAA AGGCGTAGGC
GACGATGCGG CGGTAATGGA TTTTAAAAAT AAAAAAACTG TCGTCTCTAC CGACCTGCTT
ATTGAAGGTG TACATTTCGA CCTTAGCTAT GTACCGCTGA AGCATTTAGG ATACAAGTCG
GTAGTAGTGA ACGTATCGGA TATCTATGCG ATGAACGCTA CGGCTACCCA GATAACCGTA
TCGATAGCGG TATCCAATCG CTTTCCGTTG GAAGCCTTAG AAGAACTCTA TGCGGGTATT
CGCCTAGCCT GCAAGCATTA TAAGGTAGAC TTAGTAGGAG GCGACACGAC CTCATCTACA
CGCGGACTCA TCATCTCGGT AACGGCGATA GGTGAAGCGG AAGCATCGGA CTTAGTATAT
CGTAACGGAG CGCAACCTAA CGACCTTGTG GTACTCACGG GCGATATAGG GGGTGCCTAT
ATGGGTTTAC AGATATTGGA ACGCGAAAAG GCGGTCTTTC AGGTAAACCC AAACTCTCAA
CCCGATATAG AGATGTATTC TTACATTTTG GAACGCCAGC TCAAACCCGA AGCCCGCAAG
GACATTCCGC CACTGCTCAA ACAATTAGGT GTAAAACCTA CTGCTATGAT GGATGTAAGC
GACGGATTGT CGTCAGAGAT ATTGCACATT TGCAAACAAT CGGGGGTAGG TTGTAGGTTA
TATGAAGACA AAATACCGCT TGACCCACAA GTGATTAGCA CTTGTGAGGA GTTCAATTTA
GATAGCACTA CCATAGCCCT AAGTGGCGGT GAAGACTACG AACTGCTGTT TACTATTGCC
CAAGCAGATT ACGATAAGAT AAAAGGCAAT CCTAATTTCA CGGTCATAGG TTACATTACC
GATAAAAGCG AAGGGGTAAA CCTCGTCACC CGTGCAGGAC AGTTTATACC GATTATAGCA
AAAGGGTGGA ACGCTTTAAC AATTAACAAT TGA
 
Protein sequence
MIEDKTPHRT SLADLGEFGL IDRLTKGFEI HNPSTLKGVG DDAAVMDFKN KKTVVSTDLL 
IEGVHFDLSY VPLKHLGYKS VVVNVSDIYA MNATATQITV SIAVSNRFPL EALEELYAGI
RLACKHYKVD LVGGDTTSST RGLIISVTAI GEAEASDLVY RNGAQPNDLV VLTGDIGGAY
MGLQILEREK AVFQVNPNSQ PDIEMYSYIL ERQLKPEARK DIPPLLKQLG VKPTAMMDVS
DGLSSEILHI CKQSGVGCRL YEDKIPLDPQ VISTCEEFNL DSTTIALSGG EDYELLFTIA
QADYDKIKGN PNFTVIGYIT DKSEGVNLVT RAGQFIPIIA KGWNALTINN