| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0390 |
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| Symbol | |
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| ID | 8366796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 497217 |
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| End bp | 498437 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644982811 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003140514 |
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| Protein GI | 256819235 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATAC AAAATCTTTT TAAAATAGCG TGGCGTGCCC TTTTGCTGAA CAAAACAAGG
GCGATGCTTA CAATGCTGGG CATCATCATT GGGGTGGGCT CAGTGATAAC AATGCTTGCC
ATTGGCGAGG GTTCTAAAAA GAGTATCAAA GAGAATATCT CTAAAATGGG TACCAATATG
CTCAATATCC GTCCGGGTGC CGGTATGATG GGCGGGGTGC GTATGAGTAT GAGCGATATG
CAATCGCTGA AAATGACGGA TTACGAAGCC CTTAAAAAAG AAGGTACCCT ACTGAAATAT
GTATCCCCGG TAGTGAGTGG CAACGGACAA AGTATAGCGG GCGGCAACAA CTGGCCTACC
TCTATCTACG GCGTGAATAC CGAATACTTG CCTATACGCG AATGGAGTGT GGCTGAAGGG
AGTATGTTTG GTGAAGATGA GATTACTAAT TTTTCTAAGG TAGCCGTGAT AGGGCAAACA
GTGGCTAAGA ACCTCTTTAC TAATGGCGAA AACCCTATTG GGCAAACCAT ACGCTTTAAG
AATATCCCTT TTAAAGTGAT TGGTATCCTT ACGAAAAAAG GTGAAAGCAA CTTTGGTCAA
GACCAAGACG ATGTGATTAT CGCCCCTTAT ACTACGGTAC AAAAGCGTAT TTTGGCGCAA
ACATTCTTGC AGAGTATTGT GGCTTCGGTG CTCAATGAAA GTCAGTCGGA GAATGCGGTA
AACCAAGTTA AGAAGATTTT GGAGCGCACG CATAACCTTT CGGCTACACA AGAAAATGAT
TTCAATGTGT TTTCGCAACA AGAGCTCATC AGTACGTTTA GCTCTACCAG CGAGATGCTT
ACCGTGTTGT TGGTAGCTAT TGCCAGCATT TCGCTCATCG TAGGGGGAAT AGGCATTATG
AACATTATGT ACGTATCAGT AAAAGAGCGC ACTAAGGAAA TAGGCTTGCG TATGGCTATT
GGGGCTAAGG GCAAGGATAT TTTGGCACAA TTCCTTATCG AGTCGGTGCT TATTAGCATC
ACTGGGGGGG TATTAGGGGT AATTATTGGT TTATTAGCAA CGGTAGGCGT ATCGCTGTTT
ATAGGTTGGC CAGTGAGTAT CACCTTGTAT TCTATTGTAA TATCCTTCTT AGTATGTACT
ATTACAGGGG TGTTCTTCGG TTGGTACCCT GCTCGCAAAG CAGCCGAGTT AGAACCTATT
AGTGCTCTCA GATACGAATA G
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| Protein sequence | MNIQNLFKIA WRALLLNKTR AMLTMLGIII GVGSVITMLA IGEGSKKSIK ENISKMGTNM
LNIRPGAGMM GGVRMSMSDM QSLKMTDYEA LKKEGTLLKY VSPVVSGNGQ SIAGGNNWPT
SIYGVNTEYL PIREWSVAEG SMFGEDEITN FSKVAVIGQT VAKNLFTNGE NPIGQTIRFK
NIPFKVIGIL TKKGESNFGQ DQDDVIIAPY TTVQKRILAQ TFLQSIVASV LNESQSENAV
NQVKKILERT HNLSATQEND FNVFSQQELI STFSSTSEML TVLLVAIASI SLIVGGIGIM
NIMYVSVKER TKEIGLRMAI GAKGKDILAQ FLIESVLISI TGGVLGVIIG LLATVGVSLF
IGWPVSITLY SIVISFLVCT ITGVFFGWYP ARKAAELEPI SALRYE
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