| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0385 |
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| Symbol | |
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| ID | 8366791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 492505 |
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| End bp | 493734 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644982806 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003140509 |
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| Protein GI | 256819230 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC ACATTAAGAA AATCATCATT ATCGTACTAT TAGCCGTAGT GGCTTTTGGG
GTGTATCACT TCTTTATGAA GGAAAAACCT TCTTTTATCG TCCTGCAAAC CGATAAGGTA
ACCGAAGGTG ACGTTACTAC CGAAGTAACT GCTACTGGTA GCGTACAGCC AGTGGACGAG
GTGGAAGTAG GTACCCAAGT ATCGGGATTG GTAAGCAAGA TTTACGTAGA TTACAACAGC
CAAGTGAAGA AAGGACAGCT ACTGGCGGAA CTCGACAAGA CGAACCTACA AGAAATGGTT
GTAAATGCTA CTGCCAACTA CCAATCGGCA CTCAACGAAC TGAATTACTA CCGTCAGAAT
TACGAACGAC AACAGAAAAT GTACAATGCC CAAGTGATTA GCAAATCGGA CTACGAGCAG
GCATTGTATC AGTTCAACAA CGCGAAAACA AATGTAGCAC AACGTCTTAC GACCCTCAAT
CAAGCAAAAA CCAATTTGGG GTATGCCAAT ATCTATTCGC CTATCAATGG GATTATCCTC
AGCAAAGAGG TAGAAGAAGG GCAAACGGTA GCCGCCTCGA TGAGTGCGCC TACACTCTTC
AAAATAGCCA AAGACATCAA GCGTATGCAG GTGGAAGCCG ATGTAGACGA AGCCGATATA
GGACAAGTGA AAGTAGGGCA ACGTGTGAGC TTTACCGTAG ATGCTTACCC CCAAGAAGAG
TTTTCGGGGA AGGTAACCCA AGTGCGTCTA TCACCTACTA CGACTTCGAA CGTGGTGACC
TATACGGTGA TAGTAGAGGC TGAAAACCCC GATGAGAAGC TCAAACCTGG GCTTACCGCG
ACCATCGCTA TCTATACCAA TGAGCTAAAA GGCGTAACCA TAGTGCCTGC GAAAGCGATG
AATTTCACCC CAGACATCGA CCTACTGATG CAATACTACG CTCAGAAAGG CATTACAGCT
GAAGTCCCTA AAGTACAGCA CGGCAAGGGT AAAAACAAAT ACGTATGGGT AGTGAACACT
GACGGTAGTC TTGCCCAAAA AGCGATAACC ATAGGTAGTA ATGATGGTAT CAACGTGCAA
GTGGTAAGCG GACTCAGTGT TGGAGAAAAA GTAGCTACCA ACCTGCAAAG CAATCGCCCT
CAAGTAGCAG AAGGTGAGAA AAATAACGAC GATAGCAGTA GTCCGTTTAT GCCTAAACGC
CCCCGTCGTG ATAACTCAAA AGCCAAATAA
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| Protein sequence | MKKHIKKIII IVLLAVVAFG VYHFFMKEKP SFIVLQTDKV TEGDVTTEVT ATGSVQPVDE
VEVGTQVSGL VSKIYVDYNS QVKKGQLLAE LDKTNLQEMV VNATANYQSA LNELNYYRQN
YERQQKMYNA QVISKSDYEQ ALYQFNNAKT NVAQRLTTLN QAKTNLGYAN IYSPINGIIL
SKEVEEGQTV AASMSAPTLF KIAKDIKRMQ VEADVDEADI GQVKVGQRVS FTVDAYPQEE
FSGKVTQVRL SPTTTSNVVT YTVIVEAENP DEKLKPGLTA TIAIYTNELK GVTIVPAKAM
NFTPDIDLLM QYYAQKGITA EVPKVQHGKG KNKYVWVVNT DGSLAQKAIT IGSNDGINVQ
VVSGLSVGEK VATNLQSNRP QVAEGEKNND DSSSPFMPKR PRRDNSKAK
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