| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0384 |
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| Symbol | |
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| ID | 8366790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 491106 |
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| End bp | 492440 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644982805 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003140508 |
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| Protein GI | 256819229 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.895564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA CCTTGTACAT ATCTTTTTTG TGTCTCTGTC CTTTGTTAGC AGGGGCTCAA
GCGAAACAAT GGTCGCTGGC AGACTGTATC AACTATGCGG TACAGAACAA TATTTCTGTA
AAGAAGACGG AACTGAACCA GCAGACGGCT GAAATCAATT ACAGTCAGGC GAAGAGCAAC
CGCTTGCCTA CGGTAAGTGG TTCGGCTTCG GCAAACCAGA ATTACGGTTC GGCAATCAAT
CAGATTTCTA ACGAGCGGGT GTCGCGTCGT ACGTTCTCCA ACAACTTTGG GGTATCGGCA
TCTATGCCAC TCTATCAGGG CAATAAACTG AACCTACAAG TAGACCGCAG TAAGTTATTG
CTCGAACAGA ACGAACTGTA CGTGCAAGAG GCGAAAAACA ACATCACTTT GAGTGTGCTT
GAAGCTTATC TGCAAGCCCT TTACAGCTAT GAGGGAATAG AAGTCGCTAA GAATACAGCG
CGCTCTTCGG GTGAGGAATT AAAACAAGCA CAGGGCAAGT TTGCTAATGG GTCTATTGCT
AAACTGAGTT TAGCTGAGAT AGAAACGCGT CACGCTAACA ACGAGTATGC TATTATCAAA
GCAGAAAATG AATACGAAAG TAAGGTGCTG ACCCTCAAAC AACTGTTGGA GCTTCCTCCT
AATAGTGATT TCGCTATTGC GCTCGACCTT CCCGCAGATG ATGAAACGGC GATTATCCCT
AATAAAGATG TGGTATTTGC GGAAGCCAGA CAAAAGCTCC CCAATCTAAA AATCTATCAG
TCACAACAAA AGATAGCTGA AAAAGATATT AAGATAGCCA GGGCGGGCTA TGCCCCTACT
CTATCGCTAC AAGCAGGGGT AAATACAGGA TATTCAAACC TCAACGATTT GAGCTATCGC
ACCCAGTTGG ACAGCAATTT CGGTCAGACC ATAGGAGCAT CGCTTAATAT TCCTATCTTT
TCGCAGTTCA GAAATAAGAA CAATGTGAAA CTAGCTAAGG TTACGCAACA GCAAGCGGTG
CTCGACGAAC AACAAGCGGA AAAAGACCTC TATACCAAAA TAGAAACCGC TTGGCAGAAT
GCTACCACTT ATCAAGCGCA ACAAGCAGCT TCGCGCACGG CTCGTGACAA TGCTAAATTG
GCATACGATT TGGCAGTAAA AAAGCACGAA TTCGGTGGAC TTACCAATAC CGAGCTTCTC
GTAAGCGAAA ACGGTTACCT CAACGCGGAG CAAACCTATT TGCAAAATAA GTATATGCAA
GCGCTGTATG TACAGTTGCT GAAGTTTTAT ATGGGAGTCC TCCCCCTAAC CCCCTCCCAA
GTAGGGGGAA TGTAG
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| Protein sequence | MKRTLYISFL CLCPLLAGAQ AKQWSLADCI NYAVQNNISV KKTELNQQTA EINYSQAKSN
RLPTVSGSAS ANQNYGSAIN QISNERVSRR TFSNNFGVSA SMPLYQGNKL NLQVDRSKLL
LEQNELYVQE AKNNITLSVL EAYLQALYSY EGIEVAKNTA RSSGEELKQA QGKFANGSIA
KLSLAEIETR HANNEYAIIK AENEYESKVL TLKQLLELPP NSDFAIALDL PADDETAIIP
NKDVVFAEAR QKLPNLKIYQ SQQKIAEKDI KIARAGYAPT LSLQAGVNTG YSNLNDLSYR
TQLDSNFGQT IGASLNIPIF SQFRNKNNVK LAKVTQQQAV LDEQQAEKDL YTKIETAWQN
ATTYQAQQAA SRTARDNAKL AYDLAVKKHE FGGLTNTELL VSENGYLNAE QTYLQNKYMQ
ALYVQLLKFY MGVLPLTPSQ VGGM
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