| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0362 |
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| Symbol | |
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| ID | 8366768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 453934 |
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| End bp | 455805 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644982783 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003140486 |
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| Protein GI | 256819207 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000617875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTATCT TTGCGCGAAT AAACACCCGT GTAACTTGCA CTATGAAATA CATTATTACC
CTTATGGGAC TATTTACTTT TGGAATGACT CACGCTCAGA TTCAGCGTGT AGAACCGCCT
TTTTGGTGGG AAGGAATGCA CTACAGCCAA GTGCAGGTAT TGCTCTATGG CAAAAATATC
GCTCAGTACA ATGTGGAGAG CGATTTGCCT ATTGTAAACA TACTGAAAAC AGAGAACCCT
AACTATCTGT TTGTAACCGT CGATACCAAA GATAAAAAAG CGGGCAACTA TACCATTTCG
CTATTGCAAA AGAAAAAGAA AGTGGGCAGT GTTCGCTACG AATTAAAAGC GCGTCGTGAG
GGCTCGGCTT ACCGCAAGAG TTTCGACAGC AGTGATATGG TTTACCTGAT TATGCCCGAC
CGCTTTGCCA ATGGTAAACC CGACAACGAT TCGCACCCCG CACTTACTGA TAAGCTCAAC
CGCTCAGATT CTTTCGGTCG TCACGGGGGG GACATTCAGG GGATTATCGA CCATTTGGAT
TATATACAAT CCTTAGGTGC TACGGCTATA TGGAGTACGC CCTTATGTGA GGACAACGAA
CCACAACATT CTTATCACAC TTATGCCCAA ACCGATGTGT ACAAAATAGA CCCGCGTTAT
GGTACTAATG AAGAGTACCG ACAGCTCTCA GCGGCTTTGC ACAAGCGCGG TATGAAGCTC
ATCAAAGATT ATGTAACCAA CCACTGGGGC AGTCAGCATT GGCTCGTGAA AGACCTACCT
TGCTACGACT GGTTACACCA ATTTCCTGGT TATGGACAGA GTTCTCTTAA GATAACAACT
CAGATGGACA GCAATGCCTC GGAATGGGAC AAAAAGTACT GCGAAAAAGG TTGGTTTGCT
CGTTCTATGC CCGACCTCAA CCAAGCGAAC CCATTGGTAC TAAACTACCT CACCCAGAAC
GCGATTTGGT GGATAGAATA CGCCGACCTC GACGGTTTGC GTGTGGATAC TTATCCGTAT
AACGACAAAG CAGGCATTGC CCAATGGACG AAAGCCATTA CTGATGAATA CCCGCACTTT
AACATTATGG GCGAAGTATG GCTTACTGAA AGCGCACAAG TGTCGTATTG GCAAAAGGAT
AGCCCTATCA GTGCGATACA AAGCTATAAC ACCCACCTGC CTACGGTAAT GGACTTCCCG
CTCTTCGATG CAATAGGCGA GGCTTTCCGT ACCACACCTT CGTGGGACAA AGGTATGATG
CAACTCTACG ACAACTTTGC GAACGACTTT CTGTATAAAG ACATCAACAA TCTGCTTATC
TTTGCAGAAA ATCACGATAC GGCACGTATC AATCACGTAT ATCCTAAGAT AGAGGATTAT
AAGATGATTA TCACATTGTT AGCAACGGCG CGTGGTATTC CGCAATTGTA CTACGGTAGC
GAGATAGCAA TGACAGGCGA CAAGAGTAAG GGCGATGGCG ATATACGACA GGATTTCCCT
GGTGGCTGGG CAGGCGATAC GCAGAACGCT TTTAGCGCTT CGGGGCGTAC GGCTACTCAG
AAAGAGTATT ACGATTTTAC GGCTAAGCTC TTCAATTGGC GTAAGGACAA AGCCGTAATT
CACTACGGGA AGACCAAGCA ATACTTGCCT GAAAATGAAG TGTATGTCTA TTTCCGTTAC
AACGATACCG AGACCGTAAT GGTAGTGCTC AACAACAGCG AAAAGAGCCA AACGCTCCAC
CTAAACCGCT TTGCCGAGAG TTTGGCGGGA TTTTTGAGGG GGAGAGATAT TATCTCGGGG
AAAGAGGTCT CTCTGAGTGG TGACACTTTA GAAATATCTG CTAAAACTCC TATGCTCATT
GAATTAAAAT AA
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| Protein sequence | MLIFARINTR VTCTMKYIIT LMGLFTFGMT HAQIQRVEPP FWWEGMHYSQ VQVLLYGKNI
AQYNVESDLP IVNILKTENP NYLFVTVDTK DKKAGNYTIS LLQKKKKVGS VRYELKARRE
GSAYRKSFDS SDMVYLIMPD RFANGKPDND SHPALTDKLN RSDSFGRHGG DIQGIIDHLD
YIQSLGATAI WSTPLCEDNE PQHSYHTYAQ TDVYKIDPRY GTNEEYRQLS AALHKRGMKL
IKDYVTNHWG SQHWLVKDLP CYDWLHQFPG YGQSSLKITT QMDSNASEWD KKYCEKGWFA
RSMPDLNQAN PLVLNYLTQN AIWWIEYADL DGLRVDTYPY NDKAGIAQWT KAITDEYPHF
NIMGEVWLTE SAQVSYWQKD SPISAIQSYN THLPTVMDFP LFDAIGEAFR TTPSWDKGMM
QLYDNFANDF LYKDINNLLI FAENHDTARI NHVYPKIEDY KMIITLLATA RGIPQLYYGS
EIAMTGDKSK GDGDIRQDFP GGWAGDTQNA FSASGRTATQ KEYYDFTAKL FNWRKDKAVI
HYGKTKQYLP ENEVYVYFRY NDTETVMVVL NNSEKSQTLH LNRFAESLAG FLRGRDIISG
KEVSLSGDTL EISAKTPMLI ELK
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