| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0353 |
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| Symbol | |
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| ID | 8366759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 440731 |
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| End bp | 441594 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644982774 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003140477 |
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| Protein GI | 256819198 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACAAC TAAAAATTAC CAAACAGGTA ACCAACCGTG AAACCGCGTC TCTTGATAAG
TATTTACAAG AGATCGGTCG TGTAGATTTG ATTACTGCCG ATGAAGAGGT GGAATTGGCA
CAACGCATTA AGGCAGGCGA TGTAGCTGCC TTAGAAAAAC TCACCAAAGC CAATTTGCGC
TTCGTGGTAT CAGTAGCTAA ACAATACCAA AACCAAGGGC TTACCCTGCC CGACCTTATT
AACGAAGGGA ACTTAGGGCT CATCAAAGCA GCACAACGCT TCGACGAAAC CCGTGGATTC
AAATTCATTT CCTACGCCGT ATGGTGGATT CGCCAATCTA TTCTCCAAGC CTTAGCCGAA
CAATCCCGTA TTGTGCGCTT ACCGCTGAAT AAAATAGGTT CTATCAACAA AATTAACAAG
ATGTATGCTT ATCTCGAGCA AGCCAATGAA CGCGTACCTT CAGCCGAAGA AATTGCACGT
GAGTTAGATA TGTCAGTAAA CGATGTAAAA GAATCAATGA AAAATGCAGG GCGTCATATC
TCTATGGATG CGCCTTTGGT GGAAGGAGAA GATTCTAATC TTTACGACGT GATTCGCAGT
AACGAATCGC CTAACCCCGA TAAGTCGCTT ATTTTAGATT CGTTGCGTAC CGAGATTGAG
CGTGCACTCG AAACGCTTAC CCCTCGCGAA GCCGATGTAG TTCGTTTGTA TTTCGGTCTT
TCCGACCAGC ACGCAATGAC CCTCGAAGAA ATAGGTGAAA CCTTCGACCT CACCCGCGAA
CGTGTACGTC AAATCAAAGA AAAAGCAATA CGTCGCCTTA AACACACTTC CCGTAGTAAA
ATTCTAAAAA CATATTTAGG ATAG
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| Protein sequence | MRQLKITKQV TNRETASLDK YLQEIGRVDL ITADEEVELA QRIKAGDVAA LEKLTKANLR
FVVSVAKQYQ NQGLTLPDLI NEGNLGLIKA AQRFDETRGF KFISYAVWWI RQSILQALAE
QSRIVRLPLN KIGSINKINK MYAYLEQANE RVPSAEEIAR ELDMSVNDVK ESMKNAGRHI
SMDAPLVEGE DSNLYDVIRS NESPNPDKSL ILDSLRTEIE RALETLTPRE ADVVRLYFGL
SDQHAMTLEE IGETFDLTRE RVRQIKEKAI RRLKHTSRSK ILKTYLG
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