Gene Coch_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0349 
Symbol 
ID8366755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp435806 
End bp437005 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content33% 
IMG OID644982770 
Producthypothetical protein 
Protein accessionYP_003140473 
Protein GI256819194 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.286658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TTTTTTTACG AACACTTGCC ATAGTTTTAT GGCAGGTGTT CCTTTTCACA 
AGCTGCGAAA AGGATTCTAA TATTGTTACA AAAAAAGAAA GTAAAAGAGC TGTTTTCGTT
TATATGATAG CTGATAATGA TTTAGACTTC TATGCTACTG CAAATATTAA CGAAATGGAA
ACTTTTATGG CTCAAAACCC TGAAGCTGGC TCTGTGTATG TTTATATTGA TCGCGCTAAA
AACAGAAAAA CAGCTCACCC TATACTGTAT CAAATTACTG CTGACACCTC TGCTAAAATA
AACTCTAAGA TTATAAAGGT TTATCCTGAA AATAATAGTG CCAATGAAAA AGTTTTTGCT
GAAGCACTTT CACAAGTACA AACTATTTGT GCTATTAATA ATGAGTTCTT ACGCGGACTT
GTGTTATGGT CACACGGTAG TGCTTGGCTC CCCGAGAGTG TTTCTTTAGC TTCGCAAAGA
GCTACTGCAG TCAAATCTTT TGGGCTTGAC CAAACTATGG CTAATAACGA AAACCATAAT
GCCGAAATGG ATGTCCGAAA ATTAACTATC ATTCTAAATA ATTATCACTT TGATTTTATC
CTTTTTGACG CTTGTTTTAT GGCTTCTATT GAGGTGTTTT ATGAATTGAG AAATACTACA
GATTATATCA TTGCTTCTCC TACTGAAGTG CTTGCTACAG GATTTCCCTA TAAAGATATT
TTGACTGATA TGCTTAGTGC TACAGTGAAT TACCAGAAAA TTGCTCAAAA ATATGTAGCA
TTTTTTCAGC AGAAAAAAGG TGTATTACAA TCTGCTTCAG TAGTTACTGT CAAAACAGCT
GAGCTTCCTC AGTTTGCAAC ATTATTTAAA TACTATTTAA ATACTATTTC TAGAGAAATA
ACAGACCAAA AATGGTTGCA ATATAGCCAA GATGAAGTAG ACTATCTATT TGATTTAGGA
CAGGTTGCTG ATTATTTGCA AAAAGAACAA ACTAATAAAA AACTTACCGA GCAATTAGGA
AGATTAATAA CTAATTACCA TCATACTTCT TATTTCTTTG GTAAAATACC TCTCCAAAAA
AGTTCTGGAA TCAGTATTTA TATACCTCAG TCGGCTACAC TACAAAATGA TGAATATGAA
TTTTATAAAA CATTATCTTG GACTAATGCT GTTAATATGC CTATTTTTAC TAAGCATTAG
 
Protein sequence
MKNFFLRTLA IVLWQVFLFT SCEKDSNIVT KKESKRAVFV YMIADNDLDF YATANINEME 
TFMAQNPEAG SVYVYIDRAK NRKTAHPILY QITADTSAKI NSKIIKVYPE NNSANEKVFA
EALSQVQTIC AINNEFLRGL VLWSHGSAWL PESVSLASQR ATAVKSFGLD QTMANNENHN
AEMDVRKLTI ILNNYHFDFI LFDACFMASI EVFYELRNTT DYIIASPTEV LATGFPYKDI
LTDMLSATVN YQKIAQKYVA FFQQKKGVLQ SASVVTVKTA ELPQFATLFK YYLNTISREI
TDQKWLQYSQ DEVDYLFDLG QVADYLQKEQ TNKKLTEQLG RLITNYHHTS YFFGKIPLQK
SSGISIYIPQ SATLQNDEYE FYKTLSWTNA VNMPIFTKH