Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0349 |
Symbol | |
ID | 8366755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 435806 |
End bp | 437005 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644982770 |
Product | hypothetical protein |
Protein accession | YP_003140473 |
Protein GI | 256819194 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.286658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATT TTTTTTTACG AACACTTGCC ATAGTTTTAT GGCAGGTGTT CCTTTTCACA AGCTGCGAAA AGGATTCTAA TATTGTTACA AAAAAAGAAA GTAAAAGAGC TGTTTTCGTT TATATGATAG CTGATAATGA TTTAGACTTC TATGCTACTG CAAATATTAA CGAAATGGAA ACTTTTATGG CTCAAAACCC TGAAGCTGGC TCTGTGTATG TTTATATTGA TCGCGCTAAA AACAGAAAAA CAGCTCACCC TATACTGTAT CAAATTACTG CTGACACCTC TGCTAAAATA AACTCTAAGA TTATAAAGGT TTATCCTGAA AATAATAGTG CCAATGAAAA AGTTTTTGCT GAAGCACTTT CACAAGTACA AACTATTTGT GCTATTAATA ATGAGTTCTT ACGCGGACTT GTGTTATGGT CACACGGTAG TGCTTGGCTC CCCGAGAGTG TTTCTTTAGC TTCGCAAAGA GCTACTGCAG TCAAATCTTT TGGGCTTGAC CAAACTATGG CTAATAACGA AAACCATAAT GCCGAAATGG ATGTCCGAAA ATTAACTATC ATTCTAAATA ATTATCACTT TGATTTTATC CTTTTTGACG CTTGTTTTAT GGCTTCTATT GAGGTGTTTT ATGAATTGAG AAATACTACA GATTATATCA TTGCTTCTCC TACTGAAGTG CTTGCTACAG GATTTCCCTA TAAAGATATT TTGACTGATA TGCTTAGTGC TACAGTGAAT TACCAGAAAA TTGCTCAAAA ATATGTAGCA TTTTTTCAGC AGAAAAAAGG TGTATTACAA TCTGCTTCAG TAGTTACTGT CAAAACAGCT GAGCTTCCTC AGTTTGCAAC ATTATTTAAA TACTATTTAA ATACTATTTC TAGAGAAATA ACAGACCAAA AATGGTTGCA ATATAGCCAA GATGAAGTAG ACTATCTATT TGATTTAGGA CAGGTTGCTG ATTATTTGCA AAAAGAACAA ACTAATAAAA AACTTACCGA GCAATTAGGA AGATTAATAA CTAATTACCA TCATACTTCT TATTTCTTTG GTAAAATACC TCTCCAAAAA AGTTCTGGAA TCAGTATTTA TATACCTCAG TCGGCTACAC TACAAAATGA TGAATATGAA TTTTATAAAA CATTATCTTG GACTAATGCT GTTAATATGC CTATTTTTAC TAAGCATTAG
|
Protein sequence | MKNFFLRTLA IVLWQVFLFT SCEKDSNIVT KKESKRAVFV YMIADNDLDF YATANINEME TFMAQNPEAG SVYVYIDRAK NRKTAHPILY QITADTSAKI NSKIIKVYPE NNSANEKVFA EALSQVQTIC AINNEFLRGL VLWSHGSAWL PESVSLASQR ATAVKSFGLD QTMANNENHN AEMDVRKLTI ILNNYHFDFI LFDACFMASI EVFYELRNTT DYIIASPTEV LATGFPYKDI LTDMLSATVN YQKIAQKYVA FFQQKKGVLQ SASVVTVKTA ELPQFATLFK YYLNTISREI TDQKWLQYSQ DEVDYLFDLG QVADYLQKEQ TNKKLTEQLG RLITNYHHTS YFFGKIPLQK SSGISIYIPQ SATLQNDEYE FYKTLSWTNA VNMPIFTKH
|
| |