| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0317 |
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| Symbol | groEL |
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| ID | 8366723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 397148 |
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| End bp | 398782 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644982738 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_003140441 |
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| Protein GI | 256819162 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000185818 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG ATATTAAATT TGATATAGAC GCCCGCGAAG GTTTAAAACG TGGCGTTGAT
GCATTAGCAA ATGCAGTAAA AGTAACATTA GGCCCTCGTG GTCGTAATGT AATTATTAGC
AAATCATTTG GTTCACCACA AGTAACCAAA GACGGGGTAA CCGTTGCTAA GGAAATAGAA
CTAGAAGACG CTCTCGAAAA TATGGGCGCT CAAATGGTGA AAGAAGTAGC TTCTAAAACC
AATGACCTCG CAGGCGATGG TACCACTACC GCTACTGTAT TAGCACAAGC TATCGTAAAA
GAAGGTCTTA AAAACGTAGC TTCTGGTGCT AACCCAATGG ATTTAAAACG TGGTATTGAT
AAAGCCGTAG CAAAAATCGT AGAACACTTG GCTAAACAAG CTAAAGAAGT AGGCTCTTCT
TCTGAAAAAA TCAAACAAGT AGCCTCTATC TCTGCTAACA ACGACGATAC TATTGGCGAA
CTTATCGCTC AAGCATTCGA GAAAGTAGGT AAAGAAGGGG TTATCACCGT AGAAGAAGCA
AAAGGTACAG ATACTTACGT AGATGTAGTA GAAGGTATGC AGTTCGACCG CGGTTACCTT
TCTCCTTACT TCGTAACCGA TTCTGAAAAG ATGGTTGCAG AACTCGACCA CCCTTATATC
TTGTTGTACG ACAAGAAAAT CTCTACTATG AAGGACTTGC TTCCTGTATT AGAGCCTGTA
GCTCAATCTG GCAAACCTCT TTTGATTATC GCTGAAGATA TCGATGGTGA AGCATTAGCT
ACCTTAGTAG TAAACAAATT GCGCGGTACC CTTCGCATCG CTGCTGTAAA AGCTCCTGGT
TTTGGTGACC GTCGTAAAGC AATGCTCGAA GATATCGCTA TCCTTACTGG TGGTACTGTA
ATTGCCGAAG AAAGAGGCTT TACCCTTGAA AACGCTACTA TCGATATGCT TGGTACTGCC
GAAAGAGTAA GTATCGACAA AGATAACACC ACTATTGTAA ATGGTGCTGG AAAATCTGAT
AATATCAAAG CGCGTGTAGC ACAAATCAAA GCACAAATCG AAAACACCTC TTCTGATTAT
GACCGTGAAA AACTACAAGA GCGTTTAGCT AAACTCTCTG GTGGGGTAGC AGTGCTTTAC
ATAGGTGCTG CTTCGGAAGT GGAAATGAAA GAGAAAAAAG ACCGTGTAGA TGATGCCCTT
CACGCTACTC GTGCAGCTGT TGAAGAAGGT ATCGTAGCAG GAGGTGGTAT AGCGCTTATT
CGTGCTAAAA ATGTTTTAGG AAAACTAAAA CCTCTCAATG CCGACGAAGA AACAGGTATT
AAAATTATCC TCAAAGCATT GGAAGCTCCT TTGCGCACTA TCGTAGAAAA CGCAGGTGTT
GAAGGTTCTG TAATCGTAGC TCGTGTACTC GAGGCTTCAA GAGATGCTTA CGGATACAAT
GCCAAAACAG GTACTTATAC CGATATGTTT AAAGCAGGTA TCATCGACCC TAAAAAGGTA
ACCCGTGTAG CCCTTGAAAA TGCTGCCTCA GTAGCTGGTA TGATTCTCAC TACCGAATGT
GCTTTGGTAG ACATCAAAGA CGATAAAGCA GCTGCAATGC CTCCAATGGG TGGTGGAATG
CCAGGAATGA TGTAA
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| Protein sequence | MAKDIKFDID AREGLKRGVD ALANAVKVTL GPRGRNVIIS KSFGSPQVTK DGVTVAKEIE
LEDALENMGA QMVKEVASKT NDLAGDGTTT ATVLAQAIVK EGLKNVASGA NPMDLKRGID
KAVAKIVEHL AKQAKEVGSS SEKIKQVASI SANNDDTIGE LIAQAFEKVG KEGVITVEEA
KGTDTYVDVV EGMQFDRGYL SPYFVTDSEK MVAELDHPYI LLYDKKISTM KDLLPVLEPV
AQSGKPLLII AEDIDGEALA TLVVNKLRGT LRIAAVKAPG FGDRRKAMLE DIAILTGGTV
IAEERGFTLE NATIDMLGTA ERVSIDKDNT TIVNGAGKSD NIKARVAQIK AQIENTSSDY
DREKLQERLA KLSGGVAVLY IGAASEVEMK EKKDRVDDAL HATRAAVEEG IVAGGGIALI
RAKNVLGKLK PLNADEETGI KIILKALEAP LRTIVENAGV EGSVIVARVL EASRDAYGYN
AKTGTYTDMF KAGIIDPKKV TRVALENAAS VAGMILTTEC ALVDIKDDKA AAMPPMGGGM
PGMM
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