Gene Coch_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0316 
Symbol 
ID8366722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp396845 
End bp397123 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content40% 
IMG OID644982737 
Productchaperonin Cpn10 
Protein accessionYP_003140440 
Protein GI256819161 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0011552 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAT TGAATATTAA ACCTTTAGCT GATAGAGTAG TGATTGAGCC CGCAGTGGCC 
GAAACTACTA CCGCATCAGG TATTATCATC CCTGATACTG CAAAAGAAAA ACCTCAAAAA
GGTACGGTTG TAGCCGTTGG AGCAGGTACT AAAGATAACC CTGTAACCCT AAAAGTAGGC
GATACAGTAC TCTATGGCAA ATATGCCGGT ACTGAACTAA AATTAGAAGG TAAAGACTAC
CTTATTATGC GTGAAAACGA CGTATTAGCA GTTATCTAA
 
Protein sequence
MAKLNIKPLA DRVVIEPAVA ETTTASGIII PDTAKEKPQK GTVVAVGAGT KDNPVTLKVG 
DTVLYGKYAG TELKLEGKDY LIMRENDVLA VI