| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0305 |
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| Symbol | |
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| ID | 8366711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 384453 |
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| End bp | 385775 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644982726 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003140429 |
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| Protein GI | 256819150 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTTA AAAAATATAC ATTGGGAACT CTTTTTTGTT TTTTAATCGG TAGTTTATCC
GTTGAAGCAC AGAGCTCGTT CTCCAAAGAT ACCATCAATC AAACTATTGC TAACAACAAA
CGCGAAGCTC TTCGCAAACT AAACGACAAC CCTAAGGCAA GAAAATACGA TGAAAAATGG
CTAAAAGAAC TCTCTAATTC CGATTTATTC GAGCAAATGA GTGAAGATAT CGCTACTACC
CCCACCGATG TAACCTACGA CGAACTTCCC ACTGAAGTCC TCAAAAAACG ATTAGAGAAA
CTTAACCAGA AAACTCCTTT CAATGTAGAA TATAATCCTA TCTTGGAACA GGTAATCAAG
TCGTTTCTCA AAAATCGCCG TTCTTCTTTA GAGCGCCTAA TGACCCTTAG TGATTATTAT
TTCCCGATGT TTGAACAAGA GATGAGTAAT CAAAAGATTC CTTTAGAGAT GAAGTATTTA
GCCATTATCG AGTCGGCTCT AAACCCTAAA GCTCGTTCGC GTGCAGGGGC TACAGGCTTA
TGGCAGTTTA TGTACAGTAC AGGTAAAGGT TATGGCTTAG AAGTAAATAA TTATGTTGAT
GAGCGTAGCG ACCCCATTCG CTCTACCAAA GCAGCTGCAA AATACCTAAA TGAACTCTAT
AAAATATTTG GTGACTGGGA TTTAACACTC GCCGCTTACA ATTCAGGACC CGGTAATGTA
ACCAAAGCCA TTCGCCGTTC CAATGGCAAG ACTAACTATT GGAATTTGCG CCCTTATCTT
CCCAGAGAAA CCGCTGGATA TGTACCGGCT TTCTTGGCAA CTCTCTATAT TTTTGAATAT
GCCAAAGAAC ACGGCTTCAA GCCTCAAAAG CGCGCTAATC ACGTTTTTGA AACCGATACT
ATCCGCGTAA AGCAAGCTAT ATCTTTTAAA GACATTTCCG ATATTACAGG TATGGACGTA
AAAGATATTC AGTTTTTTAA CCCTTCCTAT CAATTAGATG TTGTCCCTTA TGTTGAAGGT
CGTAACTACG CCGTGCGCTT ACCTATTTCC GAGATAGGTA AGTTTGTAGC CAACGAAGAG
GCTATCTATG CTTATCTAAA TGAAGAAAAA GCAAACCGTG AGCAACCTCT CCCTCAAGTG
GTAAAAGGCG ACCAATATGC AGGAGGCAGA TCTTCTAAGA AAACAGTCTA CACGGTAAAG
AAAGGAGATA ATTTAGGAAA GATTGCTACA CGGCACGGAG TAACAGTTTC TAATCTCAAA
CGCTGGAACC GTATCAAGGG CAGTAATATT CGTGTAGGAC AACGGCTCTC TATCTATAGG
TAA
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| Protein sequence | MTLKKYTLGT LFCFLIGSLS VEAQSSFSKD TINQTIANNK REALRKLNDN PKARKYDEKW
LKELSNSDLF EQMSEDIATT PTDVTYDELP TEVLKKRLEK LNQKTPFNVE YNPILEQVIK
SFLKNRRSSL ERLMTLSDYY FPMFEQEMSN QKIPLEMKYL AIIESALNPK ARSRAGATGL
WQFMYSTGKG YGLEVNNYVD ERSDPIRSTK AAAKYLNELY KIFGDWDLTL AAYNSGPGNV
TKAIRRSNGK TNYWNLRPYL PRETAGYVPA FLATLYIFEY AKEHGFKPQK RANHVFETDT
IRVKQAISFK DISDITGMDV KDIQFFNPSY QLDVVPYVEG RNYAVRLPIS EIGKFVANEE
AIYAYLNEEK ANREQPLPQV VKGDQYAGGR SSKKTVYTVK KGDNLGKIAT RHGVTVSNLK
RWNRIKGSNI RVGQRLSIYR
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