| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0247 |
|---|
| Symbol | |
|---|
| ID | 8366652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 321470 |
|---|
| End bp | 321967 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644982667 |
|---|
| Product | ferric uptake regulator, Fur family |
|---|
| Protein accession | YP_003140371 |
|---|
| Protein GI | 256819092 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA TAGCTGAGAA AGATAAAAAA AACACCTCCG AAGAGAACTT GGAGATTGTA
AAAAAGGTGC TTACCAAATA TTTGGAAGAC AATGGACACC GTAAGACCCC TGAACGCTAT
GCGATTGTGA AGGAGATTTA CGAATACAAC GACCATTTTG ACATAGAGAC CCTCTATGAA
AATATGAAAA AGAAAAAGTA TCGGGTGAGT AGAGTGACCC TCTACAACAC GATTGAGCTC
TTGCTGGAAT GTGGTTTAGT GCGCAAACAT CAGTTTGGAC AAAACCAAGC GTATTACGAG
AAATCGTATT TTGACCGTCA GCACGACCAC GTAATCCTTA CCGATACGGG TGAGATTGTG
GAGTTTTGTG ACCCTCGTAT TCAAGCAATA CAGAAAACCA TAGAAGAAGT TTTTAATATT
AATATTAGCA ATCACTCTCT TTATTTTTAC GGTACACGCA AAGCAGATGC CCCAAAAGAA
GAGAGAGCAA CTAAATAA
|
|---|
| Protein sequence | MKNIAEKDKK NTSEENLEIV KKVLTKYLED NGHRKTPERY AIVKEIYEYN DHFDIETLYE
NMKKKKYRVS RVTLYNTIEL LLECGLVRKH QFGQNQAYYE KSYFDRQHDH VILTDTGEIV
EFCDPRIQAI QKTIEEVFNI NISNHSLYFY GTRKADAPKE ERATK
|
|---|
| |