Gene Coch_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0150 
Symbol 
ID8366552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp178925 
End bp180256 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content39% 
IMG OID644982569 
Productmajor facilitator transporter 
Protein accessionYP_003140276 
Protein GI256818997 
COG category[R] General function prediction only 
COG ID[COG2270] Permeases of the major facilitator superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAT TAGAACGAGG ACATAAAAAA CTACTCAATG CGTGGGCTTT TTACGATTGG 
GCTAACTCTG TCTATTCTCT CACCATTGTC TCTACTATCT TCCCTATTTT CTACGGATTG
TTATTTCGCA TTGCAAAGCT CACCCATATT GAGCTCTTTG GAATGGTGAT TAAAAGCACT
TCTGTGATTG CTTTTGTAAC CGCTTTAGCT TTTGCAGTAG TGGTAGTACT CTCCCCTATT
CTCAGTGGTA TCGCCGATTA CTTAGGGAAT AAAAAGAGCT TTATGCGCTT TTTCTGCTAT
TTAGGAGCTA TCTCTTGTGT AGGGTTATAT TGGTTTTCCT TAGAACATAT TTACTTCGGA
CTCTTGTGCT ATTTTTGTGG CGTAGTAGGC TTTTGGGGGA GTATCGTATT CTATAATTCT
TATTTACCCG ATATCGCTCT CCCTGAACAG TACGACGCTG TAAGTGCCAA AGGATACAGC
TTAGGGTATA CAGGTAGTGT ATTACTGCTT ATTTTTAACC TCATAATGGT AATGAAACCA
CAATGGGTAG GCTTTGCTAC TGCTGATGCT GAAACTACTC TCACCACTAT GCGCATCTCG
TTTATTACAG TAGGAATATG GTGGATAGGG TTTAGTAGTA TCCCCTTCTA TTATCTTCCT
TCGTATAAAA AAGGTAGGGG GGAGTTCAGC AAAAGCATTC TTTTCAACGG TTTTAAAGAA
CTGCGCAAAG TATGGCAATC TCTCTCAGCT TCTCCTCGTT TGAAGTGGTA TCTTATTGCT
TTCTTTGTGT ACAGTATGGG TGTACAAACC GTTATGCTGA TAGCCACTTA TTTTGGAGAG
CAAGAAATAC AATGGGCAAA CTCCGAAGAA AGCACTATGG GGCTCATTAT AAGTGTACTC
ATTATTCAAT TAGTAGCTAT TTTAGGAGCA CACCTTACGG TTTTAACAGT GCGCAAATGG
GGTAATATTG CAGTGCTTAT TGGGCTTAAT GTTATATGGG TAGGCATCTG TTTGCTTTCA
TATTGCGTAT ATAAACCTAC TGAGTTTTAT GCAATAGCTA TTTTAGTAGG GCTTGTAATG
GGGGGCATAC AAACGCTATC ACGTTCCACC TATTCTGCTT ACTTACCCGA AACTAAAGAT
ACTACCTCTT TTTTCAGTTT TTACGATGTA ACTGAGAAAT TGGGTATTGT AATAGGAATG
GGGGTTTATG GTATGATAGA CCAATTTACC AATAATATGC GCAATGCTAC TATTTCACTA
ATAGTTTTCT TTGTTTTAGG AATGTTACTG CTTTTTAAAG TGCGAAAAGT AAGTCGTGTA
GCTAATGAAT AA
 
Protein sequence
MKPLERGHKK LLNAWAFYDW ANSVYSLTIV STIFPIFYGL LFRIAKLTHI ELFGMVIKST 
SVIAFVTALA FAVVVVLSPI LSGIADYLGN KKSFMRFFCY LGAISCVGLY WFSLEHIYFG
LLCYFCGVVG FWGSIVFYNS YLPDIALPEQ YDAVSAKGYS LGYTGSVLLL IFNLIMVMKP
QWVGFATADA ETTLTTMRIS FITVGIWWIG FSSIPFYYLP SYKKGRGEFS KSILFNGFKE
LRKVWQSLSA SPRLKWYLIA FFVYSMGVQT VMLIATYFGE QEIQWANSEE STMGLIISVL
IIQLVAILGA HLTVLTVRKW GNIAVLIGLN VIWVGICLLS YCVYKPTEFY AIAILVGLVM
GGIQTLSRST YSAYLPETKD TTSFFSFYDV TEKLGIVIGM GVYGMIDQFT NNMRNATISL
IVFFVLGMLL LFKVRKVSRV ANE