Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0150 |
Symbol | |
ID | 8366552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 178925 |
End bp | 180256 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644982569 |
Product | major facilitator transporter |
Protein accession | YP_003140276 |
Protein GI | 256818997 |
COG category | [R] General function prediction only |
COG ID | [COG2270] Permeases of the major facilitator superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAT TAGAACGAGG ACATAAAAAA CTACTCAATG CGTGGGCTTT TTACGATTGG GCTAACTCTG TCTATTCTCT CACCATTGTC TCTACTATCT TCCCTATTTT CTACGGATTG TTATTTCGCA TTGCAAAGCT CACCCATATT GAGCTCTTTG GAATGGTGAT TAAAAGCACT TCTGTGATTG CTTTTGTAAC CGCTTTAGCT TTTGCAGTAG TGGTAGTACT CTCCCCTATT CTCAGTGGTA TCGCCGATTA CTTAGGGAAT AAAAAGAGCT TTATGCGCTT TTTCTGCTAT TTAGGAGCTA TCTCTTGTGT AGGGTTATAT TGGTTTTCCT TAGAACATAT TTACTTCGGA CTCTTGTGCT ATTTTTGTGG CGTAGTAGGC TTTTGGGGGA GTATCGTATT CTATAATTCT TATTTACCCG ATATCGCTCT CCCTGAACAG TACGACGCTG TAAGTGCCAA AGGATACAGC TTAGGGTATA CAGGTAGTGT ATTACTGCTT ATTTTTAACC TCATAATGGT AATGAAACCA CAATGGGTAG GCTTTGCTAC TGCTGATGCT GAAACTACTC TCACCACTAT GCGCATCTCG TTTATTACAG TAGGAATATG GTGGATAGGG TTTAGTAGTA TCCCCTTCTA TTATCTTCCT TCGTATAAAA AAGGTAGGGG GGAGTTCAGC AAAAGCATTC TTTTCAACGG TTTTAAAGAA CTGCGCAAAG TATGGCAATC TCTCTCAGCT TCTCCTCGTT TGAAGTGGTA TCTTATTGCT TTCTTTGTGT ACAGTATGGG TGTACAAACC GTTATGCTGA TAGCCACTTA TTTTGGAGAG CAAGAAATAC AATGGGCAAA CTCCGAAGAA AGCACTATGG GGCTCATTAT AAGTGTACTC ATTATTCAAT TAGTAGCTAT TTTAGGAGCA CACCTTACGG TTTTAACAGT GCGCAAATGG GGTAATATTG CAGTGCTTAT TGGGCTTAAT GTTATATGGG TAGGCATCTG TTTGCTTTCA TATTGCGTAT ATAAACCTAC TGAGTTTTAT GCAATAGCTA TTTTAGTAGG GCTTGTAATG GGGGGCATAC AAACGCTATC ACGTTCCACC TATTCTGCTT ACTTACCCGA AACTAAAGAT ACTACCTCTT TTTTCAGTTT TTACGATGTA ACTGAGAAAT TGGGTATTGT AATAGGAATG GGGGTTTATG GTATGATAGA CCAATTTACC AATAATATGC GCAATGCTAC TATTTCACTA ATAGTTTTCT TTGTTTTAGG AATGTTACTG CTTTTTAAAG TGCGAAAAGT AAGTCGTGTA GCTAATGAAT AA
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Protein sequence | MKPLERGHKK LLNAWAFYDW ANSVYSLTIV STIFPIFYGL LFRIAKLTHI ELFGMVIKST SVIAFVTALA FAVVVVLSPI LSGIADYLGN KKSFMRFFCY LGAISCVGLY WFSLEHIYFG LLCYFCGVVG FWGSIVFYNS YLPDIALPEQ YDAVSAKGYS LGYTGSVLLL IFNLIMVMKP QWVGFATADA ETTLTTMRIS FITVGIWWIG FSSIPFYYLP SYKKGRGEFS KSILFNGFKE LRKVWQSLSA SPRLKWYLIA FFVYSMGVQT VMLIATYFGE QEIQWANSEE STMGLIISVL IIQLVAILGA HLTVLTVRKW GNIAVLIGLN VIWVGICLLS YCVYKPTEFY AIAILVGLVM GGIQTLSRST YSAYLPETKD TTSFFSFYDV TEKLGIVIGM GVYGMIDQFT NNMRNATISL IVFFVLGMLL LFKVRKVSRV ANE
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