Gene Coch_0134 details

Gene Information

• Locus tag: Coch_0134
• ID: 8366536
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: -
• Start bp: 156068
• End bp: 158071
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 644982553
• Product: hypothetical protein
• Protein accession: YP_003140260
• Protein GI: 256818981

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0021689
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAAACAG AAGAAAAAGA ATTGTACCGC TTTGTAGAAG CGGGAGATTG GACAAATTCC 
CTTTCAGATA ATGAAATGGA AAAACTTTTA GTAGAGACTG ACTTCTCTCG AGAGCAAACC 
GACGAGGGAC GTGACTACTG CTATTTCTTA CATAAATACA GCAAAATAGA CGATAATAGT 
GCCTCTGACT ATACGTTGAT GGCTTATACC CTTACCCAAC CCGAAAACTT GGAACGCGCT 
TCGATGTATG ATATGATACT CGAAGAAAAT GAGTATTTCA GTATACACCG CATCAGTGTG 
TATCGCAACG GTCAGCTAAT TGATAAAACT GCCGATACCA CTATAAAAGT ATTGGACAAC 
GAAGGGCAAA GCGGTCGTGG TATTATCAGC AGTTCTAAAA AACTGAACTT CTCCATCAAA 
GACCTTCACT TAGATGATAT CCTCATTTTG GAAGACACCA AAGAAAAGGT ATTTACTGAG 
AAAGAGTTCT TGCGTCGGGA CTTTATGAAA TACGTATATG TAACCCCTGA TACTTACTGG 
GCGTACGGTA AATATCACTT CAAGCTCATC AACAATCGCG ACAAACGCGT GGCTTATAAA 
GATGTGTTTT TCCGCGACGA GCAGGGTAAC GTAATCCCAA GTCAGGTGAA ATACTTAGCG 
CAAGGAGAGG CATTTGAGAT AGTACAAGAA AACTACATCA ACCCAGTAGA CCCTAACCGC 
GAAATCTTCC CTTTTATAGA CTTCGCTACT GATAGTACTT GGAAAGAACT TTCTAACTAT 
ATCTATCCGC TTTACGAAGA AGTGTTCAAA GCACAGCCCG CTGATTTCGC CCCCGATTTG 
GTGGAGAAAC TCAACGGTAT GGCTACCCTC GACGAGAAAT TGCAATACGC CATAGAGTTC 
GTGCAAAACA ACATCTACTA CGTGTACAAC GCCGATGAGA TGAACGGACA CAAACCTCAA 
GCGCCTGCAC TTACTTACCA AAATAAGCAA GGTGATTGTA AAGCGAAATG CGTATTGTTG 
AAATCAATCC TCAACTATCT CGGTGTAGAG GCTTCAGTGA TATTGGTGAA CTACAATTCT 
GATTATTACT TGCAATTCTA TCTCCCTTCG TTGCTTTCGT TCAATCACGT AGTGGTGAAA 
ATCAATTACG AAGGTAAAGA ATACTTTGTA GATGCAACTG CTCGTAATGA GTTTGGTAAA 
TTGGAGAAAC GCGCAGTGAT TTCTTTTTGT CACTTTATGG AGATATTGCC TAACCAAGAG 
TTACAAGTGC GCAAACCTAC CTATTTCGAC AATTTTTGTA TAGATGAGCA CATCACCTTA 
GAAGCCAAAG GCAATACGGG CAAAATACAA CTGCTTACTA CTTATCGTTA CAATCGTGCA 
AACTCTATGC GAGCTTACTT TAAGTCGAGC AACAAAAATG AACGTTTGGA CAGCTGGAAC 
AACTCCTTGT TTTATGCGCT CAACTATGTG AACGACCGTA AAGGCAAAGA TTTCCGCGAG 
ATATTCAAAG ATGCTACTTT GCAAATAGTG AAGGACGATA AGGTGGAAAA TGAATTTGTA 
GTGAAGTACG AAGCAACTAT TGAACAGCCT TATTTTATAG ACAATGAAGG TCGTCGTTTT 
TTGATGTACT ACGATGGTAG TGTGTTGAAA AACAGCATTC GTGAACACCA GCACAGCGAT 
GCGAGCTTTT GGCATAACTT CGATAGCGAG CGTTACGAAA TAGAGCTCAA AACTGATGAA 
AATATCGATA CTAAGGAAAA ATACACCGTA CAAGAGTGTG ATATCGAAAA CGAGTATTTT 
ACTCATAAAA CCCAAAAGTT TATCACTAAG AACTCTGGTA AGGTAATTGT GGAGTACAAT 
CCGCTCACGA ATATCGAATT GCCATTAGAT AAATTGGAAC CTATTCGCGA AGATTATCAC 
ACTATGGCTG ATAGCAACTT CGGTATCGGT ATCGATGTGG TAGAAAAAGG ATTCTTAAAT 
TCCTTAAAAC GATTTTTTAA ATAA 

 

Protein sequence

MQTEEKELYR FVEAGDWTNS LSDNEMEKLL VETDFSREQT DEGRDYCYFL HKYSKIDDNS 
ASDYTLMAYT LTQPENLERA SMYDMILEEN EYFSIHRISV YRNGQLIDKT ADTTIKVLDN 
EGQSGRGIIS SSKKLNFSIK DLHLDDILIL EDTKEKVFTE KEFLRRDFMK YVYVTPDTYW 
AYGKYHFKLI NNRDKRVAYK DVFFRDEQGN VIPSQVKYLA QGEAFEIVQE NYINPVDPNR 
EIFPFIDFAT DSTWKELSNY IYPLYEEVFK AQPADFAPDL VEKLNGMATL DEKLQYAIEF 
VQNNIYYVYN ADEMNGHKPQ APALTYQNKQ GDCKAKCVLL KSILNYLGVE ASVILVNYNS 
DYYLQFYLPS LLSFNHVVVK INYEGKEYFV DATARNEFGK LEKRAVISFC HFMEILPNQE 
LQVRKPTYFD NFCIDEHITL EAKGNTGKIQ LLTTYRYNRA NSMRAYFKSS NKNERLDSWN 
NSLFYALNYV NDRKGKDFRE IFKDATLQIV KDDKVENEFV VKYEATIEQP YFIDNEGRRF 
LMYYDGSVLK NSIREHQHSD ASFWHNFDSE RYEIELKTDE NIDTKEKYTV QECDIENEYF 
THKTQKFITK NSGKVIVEYN PLTNIELPLD KLEPIREDYH TMADSNFGIG IDVVEKGFLN 
SLKRFFK