| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0127 |
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| Symbol | alaS |
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| ID | 8366529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 145597 |
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| End bp | 148230 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644982546 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003140253 |
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| Protein GI | 256818974 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0445567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCGC AAGAAATAAG AGAACAATTC CTAAAATTCT TTGAAAGCAA AGGGCACACT
ATTGTTCCCT CGGCTCCTAT GGTGGTTAAA AACGACCCTA CCCTGATGTT TACCAACGCT
GGTATGAACC AATTTAAAGA GTTCTTCCTT GGTAATGCTA AACCTAAATA CAAACGCGTA
GCCGATACTC AAAAGTGTTT GCGCGTATCG GGTAAGCACA ACGATTTGGA AGAGGTAGGT
CGGGACACGT ATCACCACAC GATGTTTGAG ATGCTTGGCA ACTGGTCGTT TGGCGATTAC
TTCAAAAAAG AAGCCATTAG CTGGGCGTGG GAATTGCTCA CCGAAATATA CAAAATTCCC
AAAGAAAACC TCTATGTAAC CGTTTTTGAA GGCAGTGAAG AAGACGGCGT GCCTTTTGAC
CAAGAAGCCT ATGATATATG GAAAGAACGG ATTGCCGAAA ACCATATACT TCTCGGAAAT
AAAAAAGATA ACTTTTGGGA AATGGGTGAC CAAGGTCCTT GTGGTCCTTG TACCGAAATT
CACGTGGATA TCCGTTCAGA TGAAGAAAAA GCCAAAGTGC CAGGTCGCGA CCTTGTGAAT
AACGACTACC CTCAGGTAAT TGAGATTTGG AACAATGTGT TTATGGAGTT CAACCGCAAA
GCCGACGGTA GTCTCGAAAA ACTACCTTCT CGCAACGTGG ATACAGGTAT GGGTTTTGAA
CGCCTCTGTA TGGTTTTGCA GAAGAAACAA TCAAATTACG ATACCGATGT GTTTACCCCA
CTGATTCACA AAGTGGAAGA GATTACCCAA AGTAGATATA CCTCAGGCGA CCGTGTAACT
GCTGAACAAG AACAAGTAAA CATTGCCATT CGTGTGATTT CAGACCATAT TAGGGCTGTG
GCTTTTGCTA TTACCGACGG TCAGTTGCCC TCTAACAATG GTGCTGGTTA TGTGATACGC
CGTATTTTGC GTCGTGCTAT TCGCTATGGT TTTACTTTCT TAAACCAAAA AGAGCCGTTT
ATCTACAAAT TAGTAGAGAC ACTCTCTAAC CAAATGGGAG GTACTTTCCC CGAATTGGAG
AAACAGCAAT TCCTGATTAT GAGCGTCATA AAAGAAGAAG AAGCCTCTTT CTTGCGCACG
CTTGAACAAG GTTTGCTAAT GCTAGATGTG ATGATACAAA ACAGTCCTGG CAAGCAACTA
TCGGGCGGTA AAGCCTTTGA ATTATACGAT ACTTACGGCT TCCCCAAAGA TTTGACAGCG
CTCATTCTTT CGGAGAAAGG GCTCACTATG GACGAAGCTA GTTTTGAAGA ACAATTACAA
AAACAAAAAG AGCGTTCACG TGCAGCAGCT CAAATAAAAG CTGACGACTG GGTAATACTC
CGCGACGACG ATGAAGAGGA GTTTATAGGC TATGATACCT TAGAGGCTGT GGTGCGATTG
GTGAAATACC GCAGAGTGGA AAGTCAGAAA GACGGTACTC ATTTTCAGCT GGTATTCAAC
ACTACTCCTT TCTATCCGGA AGGAGGTGGA CAAGTGGGTG ATAAAGGTAC TCTACAAAGT
GCTAACGGTG AGCTTATCTA TATTTTAGAT ACCAAAAAAG AAAATAACCT TATCATTCAC
ATTTCAGAAC ACCTGCCTAC TAATTTAAAC GACCCTTTCA AAGCAGAAGT ACATTCAATA
TCACGTGAAA TGGCAGAAGC TAACCACAGT GCTACCCACC TATTACACCA AGCCCTACGC
GAAGTATTGG GTACACACGT TGAACAGAAG GGCTCTCGTG TAGCTCCTGA AACTTTGCGC
TTCGACTTCT CTCACTTTGC TAAACTTACT GAGGAAGAGC TCAAAAAGGT AGAGCAATTG
GTAAACAGAC GTATTTTTGA AAAAATTCCT TTGCAAGAGC ATCGTAATAT TCCTATGCAA
CAAGCAGTGG AATCAGGAGC TATGGCACTC TTTGGTGAAA AGTACGGCGA CCGTGTGCGT
ATGATTCAGT TTGGTGATAG CAAAGAGCTT TGTGGGGGAA CTCACGTAAA GAACACAGGC
GATATTTGGT ATTTCAAAAT CATCTCAGAA GGTGCAGTAG CAGCAGGTAT TCGCCGTATT
GAAGCGATTA CCCGTGGAGG AGCTATGAAG TATTTTACAG AACAAGAACA GCTGGTAGAA
CAAATAAAAG AAACGCTGAA AAACGCGCAA GACCCTGTAA AAGCGATTAG GCACTTGCAA
GAAGAAAATG CAGCTTTACA CAAAGAGCTT GAACAGTTGA GAAAAGAACA AGCTAAACAA
CTTAAAACAA GCATCAAAGC TGAATTTACA GAAGTAAATG GTGTTCAGTG TCTCGTAAAA
CAAGTAGATG CAGAAGTGGC AACTCTCAAA GACCTTGCTT TCGAGTTAGG TAATGAGGTG
AAAAATGCTT TTATATTCTT TGCATCAGCT CACGAAGAAG GCAAAGCACT CTTGTTATGC
TATATCAATA AAGATTTGGC ACAAGCCAAA GGATTAGATG CTGGTAAGAT AGTACGAGAA
CTGGGCAAAT ACATTCACGG AGGAGGTGGC GGACAGCCAT TCTTTGCAAC CGCAGGAGGT
AAAAACCCCG GTGGTATTAC CGAAGCACTT TCTAAGGTTA AAGATTATTT ATAA
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| Protein sequence | MTSQEIREQF LKFFESKGHT IVPSAPMVVK NDPTLMFTNA GMNQFKEFFL GNAKPKYKRV
ADTQKCLRVS GKHNDLEEVG RDTYHHTMFE MLGNWSFGDY FKKEAISWAW ELLTEIYKIP
KENLYVTVFE GSEEDGVPFD QEAYDIWKER IAENHILLGN KKDNFWEMGD QGPCGPCTEI
HVDIRSDEEK AKVPGRDLVN NDYPQVIEIW NNVFMEFNRK ADGSLEKLPS RNVDTGMGFE
RLCMVLQKKQ SNYDTDVFTP LIHKVEEITQ SRYTSGDRVT AEQEQVNIAI RVISDHIRAV
AFAITDGQLP SNNGAGYVIR RILRRAIRYG FTFLNQKEPF IYKLVETLSN QMGGTFPELE
KQQFLIMSVI KEEEASFLRT LEQGLLMLDV MIQNSPGKQL SGGKAFELYD TYGFPKDLTA
LILSEKGLTM DEASFEEQLQ KQKERSRAAA QIKADDWVIL RDDDEEEFIG YDTLEAVVRL
VKYRRVESQK DGTHFQLVFN TTPFYPEGGG QVGDKGTLQS ANGELIYILD TKKENNLIIH
ISEHLPTNLN DPFKAEVHSI SREMAEANHS ATHLLHQALR EVLGTHVEQK GSRVAPETLR
FDFSHFAKLT EEELKKVEQL VNRRIFEKIP LQEHRNIPMQ QAVESGAMAL FGEKYGDRVR
MIQFGDSKEL CGGTHVKNTG DIWYFKIISE GAVAAGIRRI EAITRGGAMK YFTEQEQLVE
QIKETLKNAQ DPVKAIRHLQ EENAALHKEL EQLRKEQAKQ LKTSIKAEFT EVNGVQCLVK
QVDAEVATLK DLAFELGNEV KNAFIFFASA HEEGKALLLC YINKDLAQAK GLDAGKIVRE
LGKYIHGGGG GQPFFATAGG KNPGGITEAL SKVKDYL
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