Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0103 |
Symbol | rpsP |
ID | 8366505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 124157 |
End bp | 124708 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644982522 |
Product | 30S ribosomal protein S16 |
Protein accession | YP_003140229 |
Protein GI | 256818950 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0228] Ribosomal protein S16 |
TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGTAA AAATTAGATT ACAACGTCAC GGAAAAAAAG GCAAGCCTTT CTATTGGATT GTAGCTGCTA ATTCACGTGC AAAAAGAGAT GGTAAATTCC TTGAAAAATT AGGAACTTAC AATCCTGTTA GCAATCCTGC TCAGATTGAA ATAGATGTAG ATGCAGCTGT AAAATGGTTG AAAAACGGAG CACAACCTAG CGACACAGCA CGTCGTATTC TTTCTTACAA AGGGGTATTG CTTAAATACC ACTTGCTTGG TGGAGTTGCC AAAGGAGCTT TGACCGAAGA ACAAGCAGAG GCTAAGTTCA ATGCTTGGAT AGAAGAGAAA GCTAACAAAG TATCTACAAA AGAGCAAAAA TTAGCTAAAG AGAAAGCAGA AGCAAAAGCA AAGGCTTTGG ACGCTGAAAA AGAAGCTAAT GAGAAACGCA AGAACGCCGC TGTAGCCAAA GCTACCGAAG CAACAGTTGA AGCAACTGAA GAGGTTACAG AAGCTACGGA AGCCCCAGAA GCTGAAGCTC CTGCTGAAGA AAATAACGAA ACTGAGGCAT AA
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Protein sequence | MPVKIRLQRH GKKGKPFYWI VAANSRAKRD GKFLEKLGTY NPVSNPAQIE IDVDAAVKWL KNGAQPSDTA RRILSYKGVL LKYHLLGGVA KGALTEEQAE AKFNAWIEEK ANKVSTKEQK LAKEKAEAKA KALDAEKEAN EKRKNAAVAK ATEATVEATE EVTEATEAPE AEAPAEENNE TEA
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