| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0098 |
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| Symbol | |
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| ID | 8366500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 118759 |
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| End bp | 119700 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644982517 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_003140224 |
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| Protein GI | 256818945 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR03151] putative enoyl-(acyl-carrier-protein) reductase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.718222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAC GTATTACAGA ACTTTTTAAT ATTCAATATC CTATTATTCA GGGAGGAATG
ATATGGGCAA GTGGTTGGCG ATTGGCTTCA GCAGTGAGCA ATGCAGGCGG TTTAGGACTA
TTGGGCGCAG GCTCTATGCA CCCCGAAACC CTTACAGAAC ACATACGTAA GTGTAAAGCG
GCTACCGATA AACCTTTTGG AGTGAATATT CCTATTATGT ACCCCGAAAT GGACAAAGCT
ATTGAAGTGA TTTTGCGCGA AGGGGTAAAG ATTGTATTTA CTTCGGCAGG AAATCCGGCT
ACCTATACGT CTTTATTGCA AAAAGGAGGC ATAAAAGTAG CTCACGTAGT GAGCAGTAGT
AAGTTTGCTC TTAAAGCCCA AGTTGCCGGC GTAGATGCTG TGGTAGCTGA GGGCTTTGAA
GCGGGCGGTC ACAACGGACG TGAAGAAACT AGCACAATGG TGCTCATTCC TGCTGTACGC
AAAGTATTAA ATATTCCTCT CATTGCTGCA GGGGGAATTG CTACAGGTAG CGGAATGCTT
GCTGCCCTTG CCTTAGGTGC CGAAGGGGTA CAGATAGGTA GTAGGTTTGT GGCTACTACC
GAGGCTTCTG TACACCCTAA TTTTAAAGAA AGAGTTGTAG CAGCCGGCGA AGGTGATACA
GAACTTACGT TAAAGGAATT AGCTCCTGTA CGTTTGCTTA AAAACGGCTT CTATAAGGAA
GTAAAAGAAC TCTACAACAC TCAGCAAGCT ACTGTCGAAA ACCTTAAAGC CTTAGTAGGT
AATCGCCGTA CCAAACAAGG AATGTTTGAA GGAGACGTAG AACAAGGCGA GTTAGAAATA
GGACAAGTAG CGAGTCTCAT TACCCAAGTG CAAAGCGTAA AAGAGGTTAT TGATGAGATG
GTGGTGGAAT ACAGGAGAAG TATTAAGAAA TTACCTCATT GA
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| Protein sequence | MKTRITELFN IQYPIIQGGM IWASGWRLAS AVSNAGGLGL LGAGSMHPET LTEHIRKCKA
ATDKPFGVNI PIMYPEMDKA IEVILREGVK IVFTSAGNPA TYTSLLQKGG IKVAHVVSSS
KFALKAQVAG VDAVVAEGFE AGGHNGREET STMVLIPAVR KVLNIPLIAA GGIATGSGML
AALALGAEGV QIGSRFVATT EASVHPNFKE RVVAAGEGDT ELTLKELAPV RLLKNGFYKE
VKELYNTQQA TVENLKALVG NRRTKQGMFE GDVEQGELEI GQVASLITQV QSVKEVIDEM
VVEYRRSIKK LPH
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