Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0095 |
Symbol | |
ID | 8366497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 116395 |
End bp | 117879 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644982514 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003140221 |
Protein GI | 256818942 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.176574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAA TTATCAATTA CGCGATTATT ATTATCTATT GTACAGCATT AGTAGGCATT TTCTTATACA GCCTTTCAAT GCTTAGTTTG CTACTGAACT ATCTCAAACA TCGCAAACAA AACGACGAAG CTCCTAAGTT TAACTTGCTT GACCCTAAGG AGATTCCGTA CGTAACCATC CAGCTACCAC TTTACAACGA GAAGTATGTA GTACGTCGTT TGCTCGAAAA TATCGCAAAA TTGGAGTACC CTCGTACCAA ACTCGAAATT CAAGTGCTCG ACGACTCTAC CGACGAATCA GTAGCTGAAA CCGCTGAAAT CATTAAAGAA CTACAAGCTA CAGGCTTGGA TATTAAGCAC ATTCGTCGCA CCAATCGCGA AGGCTTTAAG GCAGGTGCTC TTAAAGAAGG GTTAGCTATT GCCAAAGGTG ATTTTGTTGC CATCTTCGAT GCCGACTTTA TGCCTCAACC CGATTGGCTC AAACGTACGG TAGTATACTT CAAAGACCCT GAAATAGGCG TAGTACAAAC TCGCTGGGGG CACATCAACC GCAATTATTC TATCCTTACT AAAATACAAG CTCTCGCTCT TGATGTCCAT TTCACTCTTG AACAAGTAGG GCGTAATTCT AAAGGATATT TCATTAACTT CAACGGTACA GCAGGTATTT GGCGTAAAGC GTGCATTTAC GATGCAGGTA ACTGGGAAGG CGACACCCTT ACCGAAGACC TCGACCTTAG CTATCGCGCT CAGTTAAAGA ATTGGAAATT CAAATATTTG GAAGATGTAG AAACTCCTGC CGAGCTTCCA GTAGTTATTT CAGCAGCACG CTCTCAACAG TTCCGTTGGA ACAAAGGAGG AGCTGAGAAC TTCCGTAAAA CAGTAAGCCG TGTATTAGCA GCTAAAAACA TAGGTTGGAA AACCAAATTT CACGGGGTAA TGCACCTCCT CAATAGCTCT ATGTTCTTAT GGGTATTTGT GGTATCAGTC CTTAGTATCC CTATGTTGTA CATCAAAAAC CAATACGGAC ATTTAGCGTG GATATTCCAC ATTACTAGTT TCTTTATCAT CAGTACTGTT ATCTTGTTTA TTTGCTATTG GTTTACTTAT AAGAACCTGC AAGGAAAGAC CTTCGACGAC TTTTTAAACT ACATCAAACT GTTTGTAACG TTCTTCTCAG TAGCCTTAGG TTTCTCTTTC CATAACACTG TTGCAGTACT CGAAGGACAC ACAGGTAAAC GCAGTGAGTT TGTGCGTACC CCTAAATTCA ATATCAATGC ACTCTCCGAT AGCTGGAAAA ACAACAAATA CATCAATACC AAACTATCGC CTAATATGAT AGTAGAATTC TTACTAATGT TGTATTTCCT CTTTGGATTA TACAGTGCCG TTCGTCTTAA CGACTTTGGT ATGTTCCCAT TCCACTGTAT GCTTACCCTA GGTTTTGGAT TTGTATTCTT CAAATCACTT ACCTCAAAAG CTTAA
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Protein sequence | MATIINYAII IIYCTALVGI FLYSLSMLSL LLNYLKHRKQ NDEAPKFNLL DPKEIPYVTI QLPLYNEKYV VRRLLENIAK LEYPRTKLEI QVLDDSTDES VAETAEIIKE LQATGLDIKH IRRTNREGFK AGALKEGLAI AKGDFVAIFD ADFMPQPDWL KRTVVYFKDP EIGVVQTRWG HINRNYSILT KIQALALDVH FTLEQVGRNS KGYFINFNGT AGIWRKACIY DAGNWEGDTL TEDLDLSYRA QLKNWKFKYL EDVETPAELP VVISAARSQQ FRWNKGGAEN FRKTVSRVLA AKNIGWKTKF HGVMHLLNSS MFLWVFVVSV LSIPMLYIKN QYGHLAWIFH ITSFFIISTV ILFICYWFTY KNLQGKTFDD FLNYIKLFVT FFSVALGFSF HNTVAVLEGH TGKRSEFVRT PKFNINALSD SWKNNKYINT KLSPNMIVEF LLMLYFLFGL YSAVRLNDFG MFPFHCMLTL GFGFVFFKSL TSKA
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