Gene Coch_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0095 
Symbol 
ID8366497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp116395 
End bp117879 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content40% 
IMG OID644982514 
Productglycosyl transferase family 2 
Protein accessionYP_003140221 
Protein GI256818942 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.176574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA TTATCAATTA CGCGATTATT ATTATCTATT GTACAGCATT AGTAGGCATT 
TTCTTATACA GCCTTTCAAT GCTTAGTTTG CTACTGAACT ATCTCAAACA TCGCAAACAA
AACGACGAAG CTCCTAAGTT TAACTTGCTT GACCCTAAGG AGATTCCGTA CGTAACCATC
CAGCTACCAC TTTACAACGA GAAGTATGTA GTACGTCGTT TGCTCGAAAA TATCGCAAAA
TTGGAGTACC CTCGTACCAA ACTCGAAATT CAAGTGCTCG ACGACTCTAC CGACGAATCA
GTAGCTGAAA CCGCTGAAAT CATTAAAGAA CTACAAGCTA CAGGCTTGGA TATTAAGCAC
ATTCGTCGCA CCAATCGCGA AGGCTTTAAG GCAGGTGCTC TTAAAGAAGG GTTAGCTATT
GCCAAAGGTG ATTTTGTTGC CATCTTCGAT GCCGACTTTA TGCCTCAACC CGATTGGCTC
AAACGTACGG TAGTATACTT CAAAGACCCT GAAATAGGCG TAGTACAAAC TCGCTGGGGG
CACATCAACC GCAATTATTC TATCCTTACT AAAATACAAG CTCTCGCTCT TGATGTCCAT
TTCACTCTTG AACAAGTAGG GCGTAATTCT AAAGGATATT TCATTAACTT CAACGGTACA
GCAGGTATTT GGCGTAAAGC GTGCATTTAC GATGCAGGTA ACTGGGAAGG CGACACCCTT
ACCGAAGACC TCGACCTTAG CTATCGCGCT CAGTTAAAGA ATTGGAAATT CAAATATTTG
GAAGATGTAG AAACTCCTGC CGAGCTTCCA GTAGTTATTT CAGCAGCACG CTCTCAACAG
TTCCGTTGGA ACAAAGGAGG AGCTGAGAAC TTCCGTAAAA CAGTAAGCCG TGTATTAGCA
GCTAAAAACA TAGGTTGGAA AACCAAATTT CACGGGGTAA TGCACCTCCT CAATAGCTCT
ATGTTCTTAT GGGTATTTGT GGTATCAGTC CTTAGTATCC CTATGTTGTA CATCAAAAAC
CAATACGGAC ATTTAGCGTG GATATTCCAC ATTACTAGTT TCTTTATCAT CAGTACTGTT
ATCTTGTTTA TTTGCTATTG GTTTACTTAT AAGAACCTGC AAGGAAAGAC CTTCGACGAC
TTTTTAAACT ACATCAAACT GTTTGTAACG TTCTTCTCAG TAGCCTTAGG TTTCTCTTTC
CATAACACTG TTGCAGTACT CGAAGGACAC ACAGGTAAAC GCAGTGAGTT TGTGCGTACC
CCTAAATTCA ATATCAATGC ACTCTCCGAT AGCTGGAAAA ACAACAAATA CATCAATACC
AAACTATCGC CTAATATGAT AGTAGAATTC TTACTAATGT TGTATTTCCT CTTTGGATTA
TACAGTGCCG TTCGTCTTAA CGACTTTGGT ATGTTCCCAT TCCACTGTAT GCTTACCCTA
GGTTTTGGAT TTGTATTCTT CAAATCACTT ACCTCAAAAG CTTAA
 
Protein sequence
MATIINYAII IIYCTALVGI FLYSLSMLSL LLNYLKHRKQ NDEAPKFNLL DPKEIPYVTI 
QLPLYNEKYV VRRLLENIAK LEYPRTKLEI QVLDDSTDES VAETAEIIKE LQATGLDIKH
IRRTNREGFK AGALKEGLAI AKGDFVAIFD ADFMPQPDWL KRTVVYFKDP EIGVVQTRWG
HINRNYSILT KIQALALDVH FTLEQVGRNS KGYFINFNGT AGIWRKACIY DAGNWEGDTL
TEDLDLSYRA QLKNWKFKYL EDVETPAELP VVISAARSQQ FRWNKGGAEN FRKTVSRVLA
AKNIGWKTKF HGVMHLLNSS MFLWVFVVSV LSIPMLYIKN QYGHLAWIFH ITSFFIISTV
ILFICYWFTY KNLQGKTFDD FLNYIKLFVT FFSVALGFSF HNTVAVLEGH TGKRSEFVRT
PKFNINALSD SWKNNKYINT KLSPNMIVEF LLMLYFLFGL YSAVRLNDFG MFPFHCMLTL
GFGFVFFKSL TSKA