Gene Coch_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0094 
Symbol 
ID8366496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp115751 
End bp116263 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content41% 
IMG OID644982513 
ProductNUDIX hydrolase 
Protein accessionYP_003140220 
Protein GI256818941 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.126747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGCA TATTTAAACA TTGCCCAAAT TGTACTTCTA CAAACATCGA ATTTCCTAAT 
AACGTGCGCT TTTTGTGCCA CGATTGCGGT TTTACCTATT TCCACAATAT TGCCGCCGCG
GTAGCAGTAG TGTTCAAGCA TAAAGATAAA ATACTATTTA CAGTCCGTAA TATGAACCCC
GACAAAGGAA AACTTGACCT CCCAGGCGGT TTTATCGACC CCAACGAAAC GGCTCAAGAA
GCAGCTTGTC GCGAAGTAAA GGAAGAAATG GGACTCATCA TCAAACCTGA GCAACTGCGC
TTCATCACCA CCTACCCCAA TAATTATCTG TACAAAAATG TACCCTACCG CACTATGGAT
ATCTTTTTCG AATGCGAGCT CAAAGCCGAA GAGGTACATA TTGTAGCCCC CGATGAAATT
AAAGAGCTCC GGTGGATTGC TCTTAAAGAT ATTCGAGAAG AAGAAATTGG TTTTATATCA
GTGCGTACAG TCATAAAACA ACTTCAAAGC TAA
 
Protein sequence
MESIFKHCPN CTSTNIEFPN NVRFLCHDCG FTYFHNIAAA VAVVFKHKDK ILFTVRNMNP 
DKGKLDLPGG FIDPNETAQE AACREVKEEM GLIIKPEQLR FITTYPNNYL YKNVPYRTMD
IFFECELKAE EVHIVAPDEI KELRWIALKD IREEEIGFIS VRTVIKQLQS