Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0094 |
Symbol | |
ID | 8366496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 115751 |
End bp | 116263 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644982513 |
Product | NUDIX hydrolase |
Protein accession | YP_003140220 |
Protein GI | 256818941 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.126747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGCA TATTTAAACA TTGCCCAAAT TGTACTTCTA CAAACATCGA ATTTCCTAAT AACGTGCGCT TTTTGTGCCA CGATTGCGGT TTTACCTATT TCCACAATAT TGCCGCCGCG GTAGCAGTAG TGTTCAAGCA TAAAGATAAA ATACTATTTA CAGTCCGTAA TATGAACCCC GACAAAGGAA AACTTGACCT CCCAGGCGGT TTTATCGACC CCAACGAAAC GGCTCAAGAA GCAGCTTGTC GCGAAGTAAA GGAAGAAATG GGACTCATCA TCAAACCTGA GCAACTGCGC TTCATCACCA CCTACCCCAA TAATTATCTG TACAAAAATG TACCCTACCG CACTATGGAT ATCTTTTTCG AATGCGAGCT CAAAGCCGAA GAGGTACATA TTGTAGCCCC CGATGAAATT AAAGAGCTCC GGTGGATTGC TCTTAAAGAT ATTCGAGAAG AAGAAATTGG TTTTATATCA GTGCGTACAG TCATAAAACA ACTTCAAAGC TAA
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Protein sequence | MESIFKHCPN CTSTNIEFPN NVRFLCHDCG FTYFHNIAAA VAVVFKHKDK ILFTVRNMNP DKGKLDLPGG FIDPNETAQE AACREVKEEM GLIIKPEQLR FITTYPNNYL YKNVPYRTMD IFFECELKAE EVHIVAPDEI KELRWIALKD IREEEIGFIS VRTVIKQLQS
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