Gene Coch_0089 details

Gene Information

• Locus tag: Coch_0089
• ID: 8366491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: -
• Start bp: 110618
• End bp: 111316
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 644982508
• Product: hypothetical protein
• Protein accession: YP_003140215
• Protein GI: 256818936

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.813046
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC TGATTTTATT AGCTTTTGCG CTACTGGTAT TGCAATCTTG TAGTGTAACG 
AATACCTTTA CATTTCATAA AGATGCTACT ATTTCTACGG ATATGGCAGT GGATATGAGT 
GAAATGCTTG CTATGCAAGC AAAGGCAAAA CAAGGAGAAA ACAGTTTGAA AAACGTGAAT 
ATGCCCGAAT TTCCGAAAGA ATGGCAATCG GTTTACGACT TTCAAAAAAC AGTAGAAAAG 
GATAGCATTC CTGCTGATAA AGCCGAATTG CTGAAACGCG CAGCTATTAA AGGACTTTTT 
AAAGACAATA AGGAAGTAGG TTTTCAGGTT AGGTTCGACC ATTTTGCGCC TGAAGAATAC 
GCTTCAATCA CCGCCACTAT TGATAGAGGG ACACGCAATA ACAACCCTTT GAGTATTTCG 
GCTTTTAAAT GGGACGGCAA GGAGTTGCGC CTCAATATCG CTGCTTTGGA ACAAAATACA 
GATGATGAAG AGCAAGCAGA GCGCGTAGCA CAGATGAAGA AGATGTTTAA TATTGATATC 
AATAATACGC TTGTATTTGA GGGCAAAATA AAGAAGATAA AAGGCAAACA CCCTTATATT 
GAGAAAATAG ATGCTCATAC CGTGAAAATT GATTTAAAAG CCACTGATGG CAAAAAGAAA 
AAGAGACGCG ATAAAGAGAT TGTAATCGTT ATCAAATAG 

 

Protein sequence

MKKLILLAFA LLVLQSCSVT NTFTFHKDAT ISTDMAVDMS EMLAMQAKAK QGENSLKNVN 
MPEFPKEWQS VYDFQKTVEK DSIPADKAEL LKRAAIKGLF KDNKEVGFQV RFDHFAPEEY 
ASITATIDRG TRNNNPLSIS AFKWDGKELR LNIAALEQNT DDEEQAERVA QMKKMFNIDI 
NNTLVFEGKI KKIKGKHPYI EKIDAHTVKI DLKATDGKKK KRRDKEIVIV IK