Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0086 |
Symbol | |
ID | 8366488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 106725 |
End bp | 108035 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644982505 |
Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
Protein accession | YP_003140212 |
Protein GI | 256818933 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.310031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGTTT TTAAAATAGA AGGTGGACAT ACCCTCAAAG GAAGTATCAC ACCACAAGGA GCTAAAAACG AAGCACTACA AGTACTTTGT GCGGTTTTAC TCACCGACCA AAAAGTTACC ATTCACAACA TTCCCGATAT TCAAGATGTG AATAAACTGA TTTCTTTGCT CGAGAATTTA GGCGTCAAAA TCCAAAAGCT CGGGAAAGGT ACTTATAGCT TTCAAGCCGA CGATATCAAT ATAGACTATT TAAAGTCCGA GGCTTTTCAT ACCGAAGGGC AAGCCCTGCG AGGTTCTATT ATGATAGTAG GCCCTCTGCT CACGCGTTTT GGAGTAGGCT ATATTCCTAA ACCGGGAGGT GATAAAATAG GTCGCCGTCG CCTCGACACC CACTTCGAAG GGTTCATCAA ATTAGGTGCC CACTTCGAAT ATGATGAGAA TAACTTTACT TATAGCGTAG TAGCCAAGAA ACTAAAAGGA AGCTATATGC TTTTAGAAGA AGCCTCAGTT ACGGGTACTT CCAATATTAT TATGGCTGCC GTATTAGCCG AAGGTACTAC AACTATTTAT AACGCAGCTT GCGAGCCCTA TGTACAACAA CTCTGCCGTA TGCTCAACGC TATGGGAGCC GATATACAAG GTATCGGTTC CAACCTCATT ACTATCAACG GGGTAGAACG CTTAGAGGGT TGTACACACA CTATCCTCCC CGATATGATT GAAATAGGTA GTTGGATAGG CTTGGCTGCT ATGACCCGCA GTGAAATTAC CATTAAGAAT GTAGGCTGGG AGCATTTGGG TATTATGCCT ACTATCTTCC AGAAATTAGG TATTACCTTC GAAAAGAAAA ACGACGATAT TCATATCCCC GCTCATACTA ACGGCTATGA AATCCAAAAT TATATTGATG GCTCTATCCT AACCGTAGCT GATGCCCCTT GGCCTGGTTT TACCCCCGAC CTACTCAGTA TCGTCCTGGT AGTCGCTACC CAAGCACGTG GGGAAGTGCT TATTCACCAA AAGATGTTTG AGAGTAGGCT ATTCTTTATC GATAAACTCA TAGATATGGG TGCTAAAATT ATACTATGCG ACCCTCACCG CGCTACCGTT ATCGGTAATG ATTTCCGTTC ACCTTTGCGC GCAACCCTAA TGACCTCGCC TGATATTCGT GCTGGTATAG CCTTGCTTAT TGCAGCTCTT TCAGCCAAAG GCACCTCTAC CATTTACAAT ATAGAACAAA TAGACCGTGG TTACGAAAAC ATCGACGGAC GACTCAAAGC CCTCGGTGCC CAAATAGTAA GAGTTTCCTA A
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Protein sequence | MGVFKIEGGH TLKGSITPQG AKNEALQVLC AVLLTDQKVT IHNIPDIQDV NKLISLLENL GVKIQKLGKG TYSFQADDIN IDYLKSEAFH TEGQALRGSI MIVGPLLTRF GVGYIPKPGG DKIGRRRLDT HFEGFIKLGA HFEYDENNFT YSVVAKKLKG SYMLLEEASV TGTSNIIMAA VLAEGTTTIY NAACEPYVQQ LCRMLNAMGA DIQGIGSNLI TINGVERLEG CTHTILPDMI EIGSWIGLAA MTRSEITIKN VGWEHLGIMP TIFQKLGITF EKKNDDIHIP AHTNGYEIQN YIDGSILTVA DAPWPGFTPD LLSIVLVVAT QARGEVLIHQ KMFESRLFFI DKLIDMGAKI ILCDPHRATV IGNDFRSPLR ATLMTSPDIR AGIALLIAAL SAKGTSTIYN IEQIDRGYEN IDGRLKALGA QIVRVS
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